Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 7 studies | 28% ± 13% | |
endothelial cell of lymphatic vessel | 6 studies | 25% ± 5% | |
astrocyte | 3 studies | 33% ± 3% |
Insufficient scRNA-seq data for expression of THSD1 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 97% | 561.76 | 2565 / 2642 | 99% | 10.99 | 697 / 705 |
breast | 100% | 1278.06 | 459 / 459 | 90% | 5.28 | 1007 / 1118 |
thymus | 100% | 749.67 | 652 / 653 | 89% | 5.08 | 539 / 605 |
esophagus | 99% | 549.40 | 1434 / 1445 | 85% | 8.11 | 156 / 183 |
lung | 100% | 1640.92 | 578 / 578 | 79% | 4.82 | 915 / 1155 |
uterus | 100% | 821.04 | 170 / 170 | 77% | 7.44 | 354 / 459 |
prostate | 100% | 604.26 | 245 / 245 | 68% | 2.67 | 340 / 502 |
skin | 100% | 856.00 | 1809 / 1809 | 64% | 3.96 | 302 / 472 |
bladder | 100% | 537.95 | 21 / 21 | 63% | 4.85 | 320 / 504 |
kidney | 93% | 302.46 | 83 / 89 | 67% | 5.09 | 606 / 901 |
adrenal gland | 90% | 249.49 | 232 / 258 | 64% | 3.05 | 148 / 230 |
intestine | 96% | 369.02 | 926 / 966 | 51% | 1.93 | 269 / 527 |
stomach | 69% | 216.73 | 246 / 359 | 55% | 2.16 | 158 / 286 |
ovary | 89% | 275.01 | 160 / 180 | 22% | 0.85 | 94 / 430 |
pancreas | 26% | 48.98 | 85 / 328 | 81% | 3.76 | 145 / 178 |
liver | 48% | 112.45 | 109 / 226 | 56% | 2.96 | 226 / 406 |
spleen | 100% | 799.17 | 241 / 241 | 0% | 0 | 0 / 0 |
adipose | 100% | 1187.67 | 1203 / 1204 | 0% | 0 | 0 / 0 |
heart | 100% | 548.03 | 857 / 861 | 0% | 0 | 0 / 0 |
muscle | 97% | 345.82 | 776 / 803 | 0% | 0 | 0 / 0 |
blood vessel | 89% | 401.36 | 1193 / 1335 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 82% | 7.09 | 37 / 45 |
lymph node | 0% | 0 | 0 / 0 | 17% | 0.50 | 5 / 29 |
eye | 0% | 0 | 0 / 0 | 14% | 0.35 | 11 / 80 |
peripheral blood | 1% | 1.07 | 5 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0048041 | Biological process | focal adhesion assembly |
GO_0010008 | Cellular component | endosome membrane |
GO_0005768 | Cellular component | endosome |
GO_0005829 | Cellular component | cytosol |
GO_0071944 | Cellular component | cell periphery |
GO_0005576 | Cellular component | extracellular region |
GO_0005925 | Cellular component | focal adhesion |
GO_0050840 | Molecular function | extracellular matrix binding |
GO_0005515 | Molecular function | protein binding |
Gene name | THSD1 |
Protein name | Thrombospondin type-1 domain-containing protein 1 (Transmembrane molecule with thrombospondin module) |
Synonyms | UNQ3010/PRO9769 TMTSP |
Description | FUNCTION: Is a positive regulator of nascent focal adhesion assembly, involved in the modulation of endothelial cell attachment to the extracellular matrix. . |
Accessions | ENST00000648254.1 [Q9NS62-2] ENST00000349258.8 [Q9NS62-2] ENST00000258613.5 [Q9NS62-1] Q9NS62 |