Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 5 studies | 23% ± 5% | |
plasmacytoid dendritic cell | 5 studies | 22% ± 5% | |
retinal pigment epithelial cell | 4 studies | 52% ± 14% | |
retinal rod cell | 4 studies | 21% ± 5% | |
astrocyte | 4 studies | 29% ± 11% | |
oligodendrocyte | 4 studies | 26% ± 9% | |
neuron | 3 studies | 16% ± 0% | |
glutamatergic neuron | 3 studies | 41% ± 19% | |
oligodendrocyte precursor cell | 3 studies | 27% ± 8% | |
epithelial cell | 3 studies | 20% ± 2% | |
alveolar macrophage | 3 studies | 30% ± 7% | |
adipocyte | 3 studies | 19% ± 1% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 3 studies | 45% ± 5% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
breast | 100% | 3617.42 | 459 / 459 | 100% | 44.09 | 1117 / 1118 |
brain | 100% | 5661.59 | 2642 / 2642 | 100% | 30.92 | 704 / 705 |
prostate | 100% | 2793.57 | 245 / 245 | 100% | 28.57 | 501 / 502 |
esophagus | 100% | 3161.81 | 1445 / 1445 | 99% | 22.16 | 182 / 183 |
lung | 100% | 3815.57 | 577 / 578 | 99% | 19.94 | 1147 / 1155 |
intestine | 100% | 2811.04 | 965 / 966 | 99% | 17.59 | 522 / 527 |
skin | 100% | 3611.40 | 1808 / 1809 | 99% | 41.37 | 467 / 472 |
pancreas | 100% | 2694.77 | 328 / 328 | 98% | 15.95 | 175 / 178 |
ovary | 100% | 2684.30 | 180 / 180 | 98% | 17.71 | 422 / 430 |
stomach | 100% | 2564.50 | 358 / 359 | 98% | 18.13 | 281 / 286 |
liver | 100% | 2611.50 | 226 / 226 | 98% | 18.80 | 397 / 406 |
thymus | 100% | 4210.61 | 652 / 653 | 98% | 32.91 | 592 / 605 |
kidney | 100% | 1964.20 | 89 / 89 | 97% | 21.95 | 876 / 901 |
uterus | 100% | 3376.88 | 170 / 170 | 97% | 18.83 | 446 / 459 |
adrenal gland | 100% | 5576.13 | 258 / 258 | 96% | 20.62 | 220 / 230 |
bladder | 100% | 2695.38 | 21 / 21 | 94% | 15.37 | 472 / 504 |
adipose | 100% | 3738.41 | 1204 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 36.35 | 80 / 80 |
muscle | 100% | 6232.78 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 1887.71 | 241 / 241 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 4524.73 | 1334 / 1335 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 96% | 21.78 | 43 / 45 |
heart | 94% | 3069.48 | 811 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 63% | 857.67 | 584 / 929 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 59% | 5.29 | 17 / 29 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0007165 | Biological process | signal transduction |
GO_0006869 | Biological process | lipid transport |
GO_0006665 | Biological process | sphingolipid metabolic process |
GO_0005783 | Cellular component | endoplasmic reticulum |
GO_0031965 | Cellular component | nuclear membrane |
GO_0016020 | Cellular component | membrane |
GO_0005789 | Cellular component | endoplasmic reticulum membrane |
GO_0008289 | Molecular function | lipid binding |
GO_0003674 | Molecular function | molecular_function |
Gene name | TEX2 |
Protein name | TEX2 protein Testis-expressed protein 2 (Transmembrane protein 96) Testis expressed 2 |
Synonyms | TMEM96 KIAA1738 |
Description | FUNCTION: During endoplasmic reticulum (ER) stress or when cellular ceramide levels increase, may induce contacts between the ER and medial-Golgi complex to facilitate non-vesicular transport of ceramides from the ER to the Golgi complex where they are converted to complex sphingolipids, preventing toxic ceramide accumulation. . |
Accessions | ENST00000583501.1 Q2YDX6 J3QKY0 J3KRY2 ENST00000584379.6 [Q8IWB9-1] ENST00000258991.7 [Q8IWB9-2] J3KRZ8 ENST00000583097.5 [Q8IWB9-1] ENST00000583922.1 Q8IWB9 ENST00000583738.1 Q7L166 |