I. Expression across cell types
Name | Number of supported studies  | Average coverage | |
|---|---|---|---|
| glutamatergic neuron | 4 studies | 31% ± 14% | |
| GABAergic neuron | 3 studies | 28% ± 8% | |
| astrocyte | 3 studies | 23% ± 3% |
Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| glutamatergic neuron | 4 studies | 31% ± 14% | |
| GABAergic neuron | 3 studies | 28% ± 8% | |
| astrocyte | 3 studies | 23% ± 3% |
Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| brain | 4 studies | 25% ± 7% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| brain | 100% | 8423.96 | 2631 / 2642 | 100% | 52.42 | 703 / 705 |
| thymus | 97% | 3159.40 | 632 / 653 | 99% | 73.39 | 601 / 605 |
| kidney | 99% | 2746.78 | 88 / 89 | 97% | 33.73 | 875 / 901 |
| prostate | 96% | 3147.40 | 236 / 245 | 99% | 25.62 | 498 / 502 |
| pancreas | 98% | 2404.12 | 321 / 328 | 97% | 23.69 | 172 / 178 |
| breast | 96% | 2891.24 | 440 / 459 | 96% | 21.74 | 1072 / 1118 |
| uterus | 99% | 4222.02 | 169 / 170 | 92% | 19.82 | 422 / 459 |
| adrenal gland | 96% | 2934.14 | 247 / 258 | 95% | 38.98 | 218 / 230 |
| bladder | 95% | 3115.10 | 20 / 21 | 93% | 15.54 | 468 / 504 |
| skin | 92% | 3762.14 | 1665 / 1809 | 93% | 21.90 | 440 / 472 |
| esophagus | 96% | 3943.97 | 1394 / 1445 | 88% | 16.39 | 161 / 183 |
| intestine | 98% | 3364.64 | 946 / 966 | 85% | 11.58 | 447 / 527 |
| ovary | 100% | 4976.08 | 180 / 180 | 83% | 12.27 | 355 / 430 |
| liver | 85% | 1902.57 | 192 / 226 | 96% | 23.98 | 388 / 406 |
| lung | 84% | 2215.58 | 488 / 578 | 90% | 21.69 | 1040 / 1155 |
| stomach | 92% | 2198.50 | 330 / 359 | 81% | 11.06 | 231 / 286 |
| ureter | 0% | 0 | 0 / 0 | 100% | 9.84 | 1 / 1 |
| muscle | 99% | 3464.33 | 792 / 803 | 0% | 0 | 0 / 0 |
| tonsil | 0% | 0 | 0 / 0 | 98% | 35.65 | 44 / 45 |
| blood vessel | 96% | 3324.22 | 1283 / 1335 | 0% | 0 | 0 / 0 |
| spleen | 95% | 2009.74 | 230 / 241 | 0% | 0 | 0 / 0 |
| adipose | 94% | 2933.53 | 1128 / 1204 | 0% | 0 | 0 / 0 |
| lymph node | 0% | 0 | 0 / 0 | 90% | 10.51 | 26 / 29 |
| heart | 85% | 1697.42 | 732 / 861 | 0% | 0 | 0 / 0 |
| eye | 0% | 0 | 0 / 0 | 85% | 15.99 | 68 / 80 |
| peripheral blood | 7% | 67.47 | 64 / 929 | 0% | 0 | 0 / 0 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| GO_0048511 | Biological process | rhythmic process |
| GO_0045944 | Biological process | positive regulation of transcription by RNA polymerase II |
| GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
| GO_0000785 | Cellular component | chromatin |
| GO_0005634 | Cellular component | nucleus |
| GO_0044877 | Molecular function | protein-containing complex binding |
| GO_1990837 | Molecular function | sequence-specific double-stranded DNA binding |
| GO_0000978 | Molecular function | RNA polymerase II cis-regulatory region sequence-specific DNA binding |
| GO_0001228 | Molecular function | DNA-binding transcription activator activity, RNA polymerase II-specific |
| GO_0042802 | Molecular function | identical protein binding |
| GO_0005515 | Molecular function | protein binding |
| GO_0000981 | Molecular function | DNA-binding transcription factor activity, RNA polymerase II-specific |
| Gene name | TEF |
| Protein name | Thyrotroph embryonic factor Alternative protein TEF Thyrotrophic embryonic factor TEF transcription factor, PAR bZIP family member |
| Synonyms | KIAA1655 |
| Description | FUNCTION: Transcription factor that binds to and transactivates the TSHB promoter. Binds to a minimal DNA-binding sequence 5'-[TC][AG][AG]TTA[TC][AG]-3'. |
| Accessions | L8E7U2 H0Y797 ENST00000266304.9 [Q10587-1] ENST00000406644.7 [Q10587-2] ENST00000413942.1 E0ZS57 Q10587 |
