Name | Number of supported studies | Average coverage | |
---|---|---|---|
astrocyte | 12 studies | 35% ± 14% | |
endothelial cell | 11 studies | 28% ± 14% | |
oligodendrocyte | 10 studies | 26% ± 9% | |
oligodendrocyte precursor cell | 10 studies | 35% ± 11% | |
GABAergic neuron | 9 studies | 45% ± 21% | |
glutamatergic neuron | 9 studies | 53% ± 23% | |
fibroblast | 7 studies | 25% ± 12% | |
neuron | 6 studies | 34% ± 16% | |
interneuron | 6 studies | 45% ± 21% | |
ciliated cell | 6 studies | 27% ± 13% | |
endothelial cell of lymphatic vessel | 5 studies | 23% ± 3% | |
retinal cone cell | 4 studies | 22% ± 7% | |
type I pneumocyte | 4 studies | 21% ± 3% | |
microglial cell | 3 studies | 26% ± 6% | |
GABAergic interneuron | 3 studies | 30% ± 8% | |
epithelial cell | 3 studies | 34% ± 13% | |
granule cell | 3 studies | 30% ± 11% | |
retinal rod cell | 3 studies | 23% ± 1% | |
ependymal cell | 3 studies | 45% ± 6% | |
pericyte | 3 studies | 20% ± 4% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
thymus | 100% | 508.53 | 653 / 653 | 99% | 8.54 | 598 / 605 |
prostate | 100% | 426.84 | 245 / 245 | 98% | 5.95 | 493 / 502 |
kidney | 100% | 515.75 | 89 / 89 | 98% | 9.11 | 884 / 901 |
ovary | 100% | 600.28 | 180 / 180 | 97% | 5.54 | 419 / 430 |
brain | 98% | 258.62 | 2595 / 2642 | 99% | 6.20 | 697 / 705 |
adrenal gland | 100% | 639.26 | 258 / 258 | 97% | 7.89 | 223 / 230 |
pancreas | 99% | 207.53 | 326 / 328 | 97% | 5.83 | 173 / 178 |
breast | 100% | 360.01 | 459 / 459 | 96% | 6.69 | 1078 / 1118 |
lung | 100% | 370.13 | 576 / 578 | 93% | 4.83 | 1077 / 1155 |
skin | 99% | 324.86 | 1792 / 1809 | 92% | 5.49 | 434 / 472 |
bladder | 100% | 449.19 | 21 / 21 | 88% | 3.94 | 445 / 504 |
uterus | 100% | 682.66 | 170 / 170 | 82% | 4.60 | 375 / 459 |
esophagus | 100% | 314.00 | 1441 / 1445 | 82% | 3.68 | 150 / 183 |
stomach | 100% | 300.88 | 359 / 359 | 77% | 3.12 | 221 / 286 |
intestine | 97% | 376.86 | 941 / 966 | 76% | 2.88 | 401 / 527 |
liver | 73% | 77.10 | 165 / 226 | 35% | 1.42 | 143 / 406 |
spleen | 100% | 231.96 | 241 / 241 | 0% | 0 | 0 / 0 |
adipose | 100% | 346.23 | 1203 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 336.19 | 1330 / 1335 | 0% | 0 | 0 / 0 |
muscle | 96% | 171.15 | 774 / 803 | 0% | 0 | 0 / 0 |
heart | 95% | 314.83 | 822 / 861 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 87% | 3.40 | 39 / 45 |
eye | 0% | 0 | 0 / 0 | 80% | 3.51 | 64 / 80 |
lymph node | 0% | 0 | 0 / 0 | 69% | 2.17 | 20 / 29 |
peripheral blood | 42% | 66.38 | 390 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_1902017 | Biological process | regulation of cilium assembly |
GO_0005096 | Molecular function | GTPase activator activity |
GO_0005515 | Molecular function | protein binding |
Gene name | TBC1D19 |
Protein name | TBC1 domain family member 19 |
Synonyms | |
Description | FUNCTION: May act as a GTPase-activating protein for Rab family protein(s). |
Accessions | ENST00000264866.9 [Q8N5T2-1] D6RA60 D6RD52 D6RDZ1 ENST00000505206.5 Q8N5T2 D6RA74 ENST00000511789.5 [Q8N5T2-2] ENST00000513596.1 ENST00000513455.5 ENST00000512840.5 |