Name | Number of supported studies | Average coverage | |
---|---|---|---|
adipocyte | 9 studies | 42% ± 21% | |
microglial cell | 7 studies | 29% ± 7% | |
endothelial cell | 6 studies | 26% ± 11% | |
fibroblast | 6 studies | 22% ± 4% | |
macrophage | 6 studies | 25% ± 7% | |
retina horizontal cell | 5 studies | 41% ± 9% | |
astrocyte | 5 studies | 24% ± 5% | |
GABAergic neuron | 4 studies | 24% ± 10% | |
interneuron | 3 studies | 23% ± 7% | |
neuron | 3 studies | 22% ± 2% | |
glutamatergic neuron | 3 studies | 34% ± 11% | |
endothelial cell of lymphatic vessel | 3 studies | 17% ± 0% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 5 studies | 21% ± 3% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
prostate | 100% | 5626.61 | 245 / 245 | 100% | 40.88 | 502 / 502 |
skin | 100% | 5134.08 | 1808 / 1809 | 100% | 106.80 | 471 / 472 |
breast | 100% | 7779.58 | 459 / 459 | 99% | 40.42 | 1111 / 1118 |
kidney | 100% | 5801.16 | 89 / 89 | 99% | 34.42 | 891 / 901 |
brain | 100% | 5113.83 | 2633 / 2642 | 99% | 28.22 | 695 / 705 |
intestine | 100% | 3526.69 | 965 / 966 | 98% | 23.20 | 514 / 527 |
esophagus | 99% | 3342.63 | 1427 / 1445 | 97% | 22.43 | 178 / 183 |
stomach | 99% | 3090.00 | 355 / 359 | 97% | 26.49 | 277 / 286 |
ovary | 100% | 3524.93 | 180 / 180 | 95% | 21.85 | 408 / 430 |
pancreas | 98% | 3236.54 | 320 / 328 | 97% | 16.78 | 172 / 178 |
lung | 99% | 3637.36 | 573 / 578 | 94% | 18.61 | 1085 / 1155 |
thymus | 100% | 3553.70 | 652 / 653 | 87% | 11.33 | 526 / 605 |
bladder | 100% | 3651.95 | 21 / 21 | 85% | 15.21 | 427 / 504 |
adrenal gland | 100% | 3277.77 | 258 / 258 | 73% | 8.82 | 169 / 230 |
uterus | 99% | 4930.64 | 169 / 170 | 69% | 15.38 | 318 / 459 |
liver | 73% | 1469.21 | 166 / 226 | 78% | 11.84 | 316 / 406 |
adipose | 100% | 8904.47 | 1204 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 360.06 | 80 / 80 |
ureter | 0% | 0 | 0 / 0 | 100% | 8.96 | 1 / 1 |
blood vessel | 100% | 4244.23 | 1333 / 1335 | 0% | 0 | 0 / 0 |
heart | 96% | 2326.15 | 826 / 861 | 0% | 0 | 0 / 0 |
spleen | 94% | 2451.54 | 227 / 241 | 0% | 0 | 0 / 0 |
muscle | 62% | 959.26 | 495 / 803 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 60% | 7.85 | 27 / 45 |
lymph node | 0% | 0 | 0 / 0 | 14% | 0.96 | 4 / 29 |
peripheral blood | 4% | 47.32 | 34 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0001919 | Biological process | regulation of receptor recycling |
GO_1902017 | Biological process | regulation of cilium assembly |
GO_0090630 | Biological process | activation of GTPase activity |
GO_0005829 | Cellular component | cytosol |
GO_0005769 | Cellular component | early endosome |
GO_0005515 | Molecular function | protein binding |
GO_0005096 | Molecular function | GTPase activator activity |
Gene name | TBC1D16 |
Protein name | TBC1 domain family member 16 |
Synonyms | |
Description | FUNCTION: May act as a GTPase-activating protein for Rab family protein(s). |
Accessions | I3L0V9 ENST00000573782.5 ENST00000571872.1 ENST00000574427.1 I3L4U4 ENST00000570373.5 ENST00000576768.5 [Q8TBP0-4] ENST00000340848.11 [Q8TBP0-2] I3L4T6 I3L0U9 ENST00000310924.7 [Q8TBP0-1] I3L235 ENST00000572862.5 [Q8TBP0-3] ENST00000574241.6 Q8TBP0 |