Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 28 studies | 27% ± 10% | |
endothelial cell of lymphatic vessel | 10 studies | 26% ± 11% | |
fibroblast | 10 studies | 22% ± 10% | |
oligodendrocyte | 10 studies | 28% ± 11% | |
endothelial cell of vascular tree | 9 studies | 21% ± 11% | |
macrophage | 9 studies | 27% ± 10% | |
capillary endothelial cell | 8 studies | 19% ± 3% | |
glutamatergic neuron | 8 studies | 37% ± 27% | |
microglial cell | 8 studies | 22% ± 6% | |
vein endothelial cell | 6 studies | 28% ± 19% | |
astrocyte | 6 studies | 31% ± 12% | |
GABAergic neuron | 6 studies | 38% ± 21% | |
naive thymus-derived CD4-positive, alpha-beta T cell | 5 studies | 20% ± 4% | |
epithelial cell | 5 studies | 38% ± 16% | |
endothelial cell of artery | 5 studies | 19% ± 4% | |
CD4-positive, alpha-beta T cell | 4 studies | 22% ± 5% | |
myeloid cell | 4 studies | 22% ± 3% | |
lymphocyte | 4 studies | 24% ± 6% | |
oligodendrocyte precursor cell | 4 studies | 33% ± 11% | |
monocyte | 4 studies | 19% ± 2% | |
interneuron | 4 studies | 42% ± 24% | |
classical monocyte | 3 studies | 18% ± 2% | |
B cell | 3 studies | 18% ± 3% | |
glomerular endothelial cell | 3 studies | 28% ± 3% | |
neuron | 3 studies | 29% ± 13% | |
ciliated cell | 3 studies | 26% ± 8% | |
pericyte | 3 studies | 27% ± 7% | |
regulatory T cell | 3 studies | 19% ± 5% | |
smooth muscle cell | 3 studies | 22% ± 4% | |
alveolar macrophage | 3 studies | 23% ± 7% | |
type I pneumocyte | 3 studies | 18% ± 3% | |
basal cell | 3 studies | 25% ± 13% | |
adipocyte | 3 studies | 21% ± 4% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 2267.55 | 1445 / 1445 | 100% | 19.48 | 183 / 183 |
lung | 100% | 3914.50 | 578 / 578 | 100% | 18.94 | 1155 / 1155 |
breast | 100% | 4402.32 | 459 / 459 | 100% | 24.41 | 1117 / 1118 |
thymus | 100% | 3114.23 | 653 / 653 | 100% | 22.57 | 604 / 605 |
ovary | 100% | 3068.53 | 180 / 180 | 100% | 13.77 | 429 / 430 |
brain | 100% | 2020.67 | 2635 / 2642 | 100% | 22.70 | 705 / 705 |
bladder | 100% | 2473.67 | 21 / 21 | 100% | 15.00 | 502 / 504 |
prostate | 100% | 2722.63 | 245 / 245 | 100% | 27.53 | 500 / 502 |
uterus | 100% | 3108.88 | 170 / 170 | 100% | 18.41 | 457 / 459 |
stomach | 100% | 2235.74 | 359 / 359 | 99% | 16.62 | 284 / 286 |
kidney | 100% | 2088.26 | 89 / 89 | 99% | 21.02 | 891 / 901 |
pancreas | 100% | 2310.25 | 328 / 328 | 99% | 18.44 | 176 / 178 |
liver | 100% | 1802.76 | 226 / 226 | 99% | 11.25 | 401 / 406 |
intestine | 100% | 2574.71 | 966 / 966 | 99% | 16.09 | 520 / 527 |
adrenal gland | 100% | 3778.47 | 258 / 258 | 98% | 19.36 | 225 / 230 |
skin | 100% | 3014.72 | 1808 / 1809 | 93% | 19.05 | 439 / 472 |
blood vessel | 100% | 3140.27 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 14.44 | 29 / 29 |
muscle | 100% | 3931.57 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 3103.19 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 20.85 | 45 / 45 |
adipose | 100% | 4487.75 | 1203 / 1204 | 0% | 0 | 0 / 0 |
heart | 97% | 1495.83 | 834 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 94% | 2044.95 | 875 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 73% | 9.20 | 58 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0043087 | Biological process | regulation of GTPase activity |
GO_1902017 | Biological process | regulation of cilium assembly |
GO_0090630 | Biological process | activation of GTPase activity |
GO_0005737 | Cellular component | cytoplasm |
GO_0005576 | Cellular component | extracellular region |
GO_0005515 | Molecular function | protein binding |
GO_0005096 | Molecular function | GTPase activator activity |
Gene name | TBC1D15 |
Protein name | TBC1 domain family member 15 TBC1 domain family, member 15, isoform CRA_d (cDNA FLJ77374) TBC1 domain family member 15 (GTPase-activating protein RAB7) (GAP for RAB7) (Rab7-GAP) |
Synonyms | hCG_25175 |
Description | FUNCTION: Acts as a GTPase activating protein for RAB7A. Does not act on RAB4, RAB5 or RAB6 (By similarity). . |
Accessions | ENST00000468049.2 ENST00000319106.12 [Q8TC07-3] ENST00000498482.5 ENST00000550746.5 [Q8TC07-1] A8K8E1 F8WDJ1 C9JA93 ENST00000485960.7 [Q8TC07-2] ENST00000462788.6 ENST00000491063.5 F8WAX5 F8WCB5 F8WF35 ENST00000472611.6 ENST00000482439.6 F8VV61 Q8TC07 |