Name | Number of supported studies | Average coverage | |
---|---|---|---|
fibroblast | 22 studies | 29% ± 11% | |
endothelial cell | 16 studies | 30% ± 14% | |
basal cell | 12 studies | 28% ± 15% | |
pericyte | 10 studies | 28% ± 11% | |
smooth muscle cell | 10 studies | 23% ± 6% | |
endothelial cell of lymphatic vessel | 9 studies | 31% ± 11% | |
epithelial cell | 9 studies | 33% ± 16% | |
connective tissue cell | 8 studies | 34% ± 8% | |
plasmacytoid dendritic cell | 8 studies | 23% ± 6% | |
capillary endothelial cell | 7 studies | 22% ± 4% | |
myofibroblast cell | 6 studies | 29% ± 6% | |
platelet | 6 studies | 26% ± 5% | |
enterocyte | 5 studies | 28% ± 6% | |
type I pneumocyte | 4 studies | 29% ± 12% | |
endothelial cell of artery | 4 studies | 30% ± 9% | |
mesothelial cell | 4 studies | 28% ± 18% | |
goblet cell | 4 studies | 22% ± 8% | |
secretory cell | 4 studies | 28% ± 4% | |
conventional dendritic cell | 3 studies | 29% ± 3% | |
vein endothelial cell | 3 studies | 25% ± 7% | |
ciliated cell | 3 studies | 23% ± 5% | |
endothelial cell of vascular tree | 3 studies | 19% ± 4% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
intestine | 100% | 5808.58 | 966 / 966 | 30% | 1.25 | 157 / 527 |
stomach | 100% | 6007.25 | 359 / 359 | 19% | 0.94 | 54 / 286 |
bladder | 100% | 6469.14 | 21 / 21 | 15% | 0.63 | 75 / 504 |
ovary | 100% | 5641.17 | 180 / 180 | 10% | 0.14 | 45 / 430 |
esophagus | 100% | 8184.82 | 1445 / 1445 | 6% | 0.07 | 11 / 183 |
uterus | 100% | 7365.68 | 170 / 170 | 5% | 0.08 | 25 / 459 |
lung | 100% | 6088.87 | 577 / 578 | 4% | 0.06 | 49 / 1155 |
kidney | 100% | 6168.47 | 89 / 89 | 3% | 0.04 | 30 / 901 |
skin | 100% | 7276.32 | 1809 / 1809 | 3% | 0.04 | 15 / 472 |
thymus | 100% | 4276.94 | 652 / 653 | 2% | 0.03 | 14 / 605 |
breast | 100% | 6016.45 | 459 / 459 | 1% | 0.01 | 9 / 1118 |
adipose | 100% | 6176.88 | 1204 / 1204 | 0% | 0 | 0 / 0 |
adrenal gland | 100% | 7835.52 | 258 / 258 | 0% | 0 | 0 / 230 |
prostate | 100% | 5959.01 | 245 / 245 | 0% | 0 | 0 / 502 |
spleen | 100% | 3304.93 | 241 / 241 | 0% | 0 | 0 / 0 |
heart | 100% | 7226.12 | 860 / 861 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 7042.79 | 1332 / 1335 | 0% | 0 | 0 / 0 |
pancreas | 95% | 2868.15 | 310 / 328 | 3% | 0.03 | 5 / 178 |
brain | 77% | 1727.43 | 2034 / 2642 | 1% | 0.02 | 10 / 705 |
peripheral blood | 60% | 1100.68 | 562 / 929 | 0% | 0 | 0 / 0 |
liver | 47% | 993.15 | 107 / 226 | 2% | 0.02 | 8 / 406 |
muscle | 42% | 636.57 | 336 / 803 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 21% | 0.27 | 17 / 80 |
lymph node | 0% | 0 | 0 / 0 | 3% | 0.04 | 1 / 29 |
tonsil | 0% | 0 | 0 / 0 | 2% | 0.03 | 1 / 45 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0030178 | Biological process | negative regulation of Wnt signaling pathway |
GO_0007266 | Biological process | Rho protein signal transduction |
GO_0008285 | Biological process | negative regulation of cell population proliferation |
GO_0016055 | Biological process | Wnt signaling pathway |
GO_2000009 | Biological process | negative regulation of protein localization to cell surface |
GO_0090630 | Biological process | activation of GTPase activity |
GO_0043231 | Cellular component | intracellular membrane-bounded organelle |
GO_0015629 | Cellular component | actin cytoskeleton |
GO_0070062 | Cellular component | extracellular exosome |
GO_0005829 | Cellular component | cytosol |
GO_0005886 | Cellular component | plasma membrane |
GO_0005737 | Cellular component | cytoplasm |
GO_0001650 | Cellular component | fibrillar center |
GO_0008013 | Molecular function | beta-catenin binding |
GO_0005515 | Molecular function | protein binding |
Gene name | TAX1BP3 |
Protein name | Tax1 binding protein 3 Tax1-binding protein 3 (Glutaminase-interacting protein 3) (Tax interaction protein 1) (TIP-1) (Tax-interacting protein 1) |
Synonyms | TIP1 |
Description | FUNCTION: May regulate a number of protein-protein interactions by competing for PDZ domain binding sites. Binds CTNNB1 and may thereby act as an inhibitor of the Wnt signaling pathway. Competes with LIN7A for KCNJ4 binding, and thereby promotes KCNJ4 internalization. May play a role in the Rho signaling pathway. May play a role in activation of CDC42 by the viral protein HPV16 E6. . |
Accessions | ENST00000225525.4 A0A087X282 O14907 ENST00000611779.4 |