Name | Number of supported studies | Average coverage | |
---|---|---|---|
oligodendrocyte | 12 studies | 44% ± 19% | |
glutamatergic neuron | 7 studies | 40% ± 25% | |
GABAergic neuron | 6 studies | 43% ± 21% | |
CD16-negative, CD56-bright natural killer cell, human | 5 studies | 18% ± 2% | |
CD4-positive, alpha-beta T cell | 5 studies | 21% ± 4% | |
naive thymus-derived CD4-positive, alpha-beta T cell | 5 studies | 19% ± 2% | |
oligodendrocyte precursor cell | 5 studies | 33% ± 13% | |
B cell | 4 studies | 17% ± 2% | |
T cell | 4 studies | 19% ± 2% | |
neuron | 4 studies | 30% ± 17% | |
endothelial cell | 4 studies | 28% ± 1% | |
plasma cell | 4 studies | 25% ± 7% | |
epithelial cell | 4 studies | 23% ± 4% | |
lymphocyte | 4 studies | 23% ± 4% | |
astrocyte | 4 studies | 33% ± 9% | |
interneuron | 4 studies | 44% ± 26% | |
plasmablast | 3 studies | 28% ± 7% | |
innate lymphoid cell | 3 studies | 21% ± 3% | |
gamma-delta T cell | 3 studies | 20% ± 3% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 12 studies | 35% ± 20% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
prostate | 100% | 1649.24 | 245 / 245 | 100% | 14.43 | 502 / 502 |
brain | 100% | 2765.29 | 2642 / 2642 | 100% | 25.00 | 702 / 705 |
thymus | 100% | 1561.19 | 653 / 653 | 100% | 13.66 | 602 / 605 |
kidney | 100% | 910.79 | 89 / 89 | 99% | 13.81 | 894 / 901 |
breast | 100% | 1132.64 | 459 / 459 | 99% | 10.35 | 1109 / 1118 |
adrenal gland | 100% | 905.21 | 258 / 258 | 97% | 16.19 | 223 / 230 |
esophagus | 98% | 1180.87 | 1417 / 1445 | 98% | 7.80 | 179 / 183 |
lung | 99% | 920.87 | 570 / 578 | 97% | 9.21 | 1121 / 1155 |
pancreas | 97% | 757.31 | 319 / 328 | 98% | 9.88 | 174 / 178 |
uterus | 99% | 1399.67 | 169 / 170 | 95% | 8.87 | 438 / 459 |
skin | 100% | 840.38 | 1800 / 1809 | 94% | 10.88 | 444 / 472 |
stomach | 99% | 1071.08 | 356 / 359 | 93% | 6.97 | 266 / 286 |
intestine | 100% | 1579.33 | 965 / 966 | 92% | 7.00 | 486 / 527 |
bladder | 100% | 1631.76 | 21 / 21 | 87% | 5.90 | 440 / 504 |
ovary | 100% | 1703.32 | 180 / 180 | 81% | 5.01 | 347 / 430 |
liver | 85% | 420.04 | 191 / 226 | 72% | 4.44 | 292 / 406 |
muscle | 100% | 3794.06 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 1177.16 | 241 / 241 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 1570.10 | 1334 / 1335 | 0% | 0 | 0 / 0 |
adipose | 100% | 1092.75 | 1202 / 1204 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 98% | 8.71 | 44 / 45 |
lymph node | 0% | 0 | 0 / 0 | 97% | 10.43 | 28 / 29 |
heart | 96% | 1594.56 | 825 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 83% | 7.54 | 66 / 80 |
peripheral blood | 36% | 304.35 | 330 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0006435 | Biological process | threonyl-tRNA aminoacylation |
GO_0008150 | Biological process | biological_process |
GO_0005575 | Cellular component | cellular_component |
GO_0005737 | Cellular component | cytoplasm |
GO_0005634 | Cellular component | nucleus |
GO_0004829 | Molecular function | threonine-tRNA ligase activity |
GO_0042802 | Molecular function | identical protein binding |
GO_0005515 | Molecular function | protein binding |
GO_0005524 | Molecular function | ATP binding |
GO_0003674 | Molecular function | molecular_function |
Gene name | TARS3 |
Protein name | threonine--tRNA ligase (EC 6.1.1.3) (Threonyl-tRNA synthetase) Threonyl-tRNA synthetase 3 Threonine--tRNA ligase 2, cytoplasmic (EC 6.1.1.3) (Threonyl-tRNA synthetase) (ThrRS) (Threonyl-tRNA synthetase protein 3) |
Synonyms | TARSL2 |
Description | FUNCTION: Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction: threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr). Also edits incorrectly charged tRNA(Thr) via its editing domain, at the post-transfer stage. . |
Accessions | ENST00000539112.5 ENST00000558533.5 ENST00000615656.1 ENST00000335968.8 [A2RTX5-1] A2RTX5 H0YKB9 B7ZLP8 |