Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 19 studies | 37% ± 15% | |
oligodendrocyte precursor cell | 15 studies | 72% ± 16% | |
microglial cell | 15 studies | 48% ± 18% | |
oligodendrocyte | 14 studies | 47% ± 16% | |
macrophage | 13 studies | 39% ± 19% | |
astrocyte | 13 studies | 38% ± 17% | |
glutamatergic neuron | 12 studies | 74% ± 22% | |
GABAergic neuron | 11 studies | 69% ± 20% | |
adipocyte | 9 studies | 30% ± 5% | |
endothelial cell of lymphatic vessel | 9 studies | 54% ± 19% | |
fibroblast | 8 studies | 36% ± 11% | |
type II pneumocyte | 7 studies | 63% ± 20% | |
smooth muscle cell | 6 studies | 32% ± 14% | |
neuron | 6 studies | 53% ± 20% | |
epithelial cell | 6 studies | 46% ± 15% | |
interneuron | 6 studies | 68% ± 20% | |
myeloid cell | 6 studies | 30% ± 12% | |
amacrine cell | 5 studies | 33% ± 14% | |
ciliated cell | 5 studies | 26% ± 8% | |
monocyte | 5 studies | 31% ± 23% | |
alveolar macrophage | 5 studies | 45% ± 25% | |
basal cell | 5 studies | 48% ± 23% | |
type I pneumocyte | 5 studies | 38% ± 9% | |
granule cell | 4 studies | 47% ± 27% | |
dendritic cell | 4 studies | 26% ± 1% | |
mesothelial cell | 4 studies | 31% ± 10% | |
retinal ganglion cell | 4 studies | 54% ± 25% | |
lymphocyte | 4 studies | 23% ± 8% | |
club cell | 4 studies | 34% ± 8% | |
differentiation-committed oligodendrocyte precursor | 3 studies | 61% ± 11% | |
GABAergic interneuron | 3 studies | 75% ± 5% | |
progenitor cell | 3 studies | 35% ± 18% | |
vein endothelial cell | 3 studies | 23% ± 9% | |
GABAergic amacrine cell | 3 studies | 56% ± 13% | |
OFF-bipolar cell | 3 studies | 58% ± 24% | |
glycinergic amacrine cell | 3 studies | 48% ± 16% | |
endothelial cell of vascular tree | 3 studies | 28% ± 10% | |
endothelial cell of artery | 3 studies | 38% ± 15% | |
connective tissue cell | 3 studies | 22% ± 4% | |
ependymal cell | 3 studies | 44% ± 12% | |
myofibroblast cell | 3 studies | 28% ± 13% | |
T cell | 3 studies | 29% ± 14% | |
respiratory goblet cell | 3 studies | 43% ± 9% | |
brush cell | 3 studies | 27% ± 8% | |
mucus secreting cell | 3 studies | 24% ± 9% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 99% | 4089.67 | 2627 / 2642 | 99% | 16.40 | 699 / 705 |
esophagus | 100% | 1443.22 | 1440 / 1445 | 96% | 12.69 | 176 / 183 |
breast | 100% | 1857.87 | 457 / 459 | 95% | 14.32 | 1058 / 1118 |
lung | 100% | 4070.93 | 576 / 578 | 94% | 11.43 | 1090 / 1155 |
prostate | 100% | 1797.05 | 245 / 245 | 92% | 5.46 | 463 / 502 |
uterus | 100% | 1714.92 | 170 / 170 | 89% | 6.46 | 407 / 459 |
kidney | 100% | 1623.08 | 89 / 89 | 87% | 5.94 | 788 / 901 |
skin | 100% | 4531.64 | 1808 / 1809 | 85% | 7.52 | 399 / 472 |
ovary | 97% | 1370.98 | 175 / 180 | 81% | 4.93 | 347 / 430 |
bladder | 95% | 1788.43 | 20 / 21 | 82% | 9.09 | 415 / 504 |
thymus | 97% | 1083.47 | 634 / 653 | 80% | 3.41 | 485 / 605 |
pancreas | 76% | 717.28 | 248 / 328 | 97% | 8.11 | 173 / 178 |
adrenal gland | 86% | 1212.96 | 221 / 258 | 82% | 25.25 | 189 / 230 |
stomach | 92% | 1059.04 | 330 / 359 | 49% | 2.65 | 139 / 286 |
intestine | 95% | 1278.18 | 916 / 966 | 43% | 2.26 | 224 / 527 |
ureter | 0% | 0 | 0 / 0 | 100% | 4.33 | 1 / 1 |
adipose | 100% | 1726.95 | 1200 / 1204 | 0% | 0 | 0 / 0 |
spleen | 93% | 893.15 | 225 / 241 | 0% | 0 | 0 / 0 |
blood vessel | 89% | 1307.70 | 1191 / 1335 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 89% | 7.75 | 40 / 45 |
heart | 61% | 635.07 | 524 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 56% | 600.41 | 520 / 929 | 0% | 0 | 0 / 0 |
muscle | 32% | 272.30 | 256 / 803 | 0% | 0 | 0 / 0 |
liver | 8% | 61.10 | 17 / 226 | 18% | 1.09 | 73 / 406 |
eye | 0% | 0 | 0 / 0 | 19% | 0.53 | 15 / 80 |
lymph node | 0% | 0 | 0 / 0 | 3% | 0.09 | 1 / 29 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0099519 | Biological process | dense core granule cytoskeletal transport |
GO_0060998 | Biological process | regulation of dendritic spine development |
GO_0061001 | Biological process | regulation of dendritic spine morphogenesis |
GO_0030424 | Cellular component | axon |
GO_0043197 | Cellular component | dendritic spine |
Gene name | TANC2 |
Protein name | Tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 Protein TANC2 (Tetratricopeptide repeat, ankyrin repeat and coiled-coil domain-containing protein 2) |
Synonyms | KIAA1148 KIAA1636 |
Description | FUNCTION: Scaffolding protein in the dendritic spines which acts as immobile postsynaptic posts able to recruit KIF1A-driven dense core vesicles to dendritic spines. . |
Accessions | ENST00000583356.5 ENST00000424789.6 [Q9HCD6-1] ENST00000389520.8 [Q9HCD6-2] ENST00000580466.1 A0A8I5KXR5 J3KTM5 ENST00000580068.5 ENST00000583016.1 J3QQY7 J3QRF0 ENST00000689528.1 Q9HCD6 J3KRP9 |