Name | Number of supported studies | Average coverage | |
---|---|---|---|
glutamatergic neuron | 13 studies | 63% ± 27% | |
GABAergic neuron | 11 studies | 54% ± 31% | |
oligodendrocyte precursor cell | 11 studies | 28% ± 11% | |
interneuron | 7 studies | 60% ± 24% | |
neuron | 5 studies | 32% ± 7% | |
retinal ganglion cell | 5 studies | 48% ± 18% | |
granule cell | 4 studies | 57% ± 14% | |
adipocyte | 4 studies | 21% ± 2% | |
endothelial cell | 3 studies | 49% ± 21% | |
GABAergic interneuron | 3 studies | 67% ± 13% | |
OFF-bipolar cell | 3 studies | 37% ± 11% | |
ON-bipolar cell | 3 studies | 37% ± 4% | |
amacrine cell | 3 studies | 38% ± 11% | |
retinal cone cell | 3 studies | 38% ± 14% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 13 studies | 45% ± 26% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 92% | 11928.49 | 2418 / 2642 | 99% | 40.36 | 697 / 705 |
breast | 82% | 2927.28 | 378 / 459 | 41% | 1.37 | 458 / 1118 |
ureter | 0% | 0 | 0 / 0 | 100% | 1.44 | 1 / 1 |
adrenal gland | 5% | 62.03 | 12 / 258 | 85% | 17.19 | 195 / 230 |
adipose | 82% | 2856.08 | 990 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 64% | 1.85 | 51 / 80 |
uterus | 24% | 226.99 | 40 / 170 | 22% | 1.40 | 103 / 459 |
pancreas | 0% | 4.18 | 1 / 328 | 38% | 1.02 | 68 / 178 |
ovary | 11% | 89.24 | 19 / 180 | 26% | 0.63 | 111 / 430 |
intestine | 20% | 220.02 | 189 / 966 | 15% | 0.46 | 77 / 527 |
esophagus | 3% | 25.87 | 39 / 1445 | 31% | 1.62 | 56 / 183 |
stomach | 9% | 94.30 | 34 / 359 | 24% | 1.47 | 68 / 286 |
skin | 22% | 249.68 | 393 / 1809 | 11% | 0.50 | 51 / 472 |
prostate | 1% | 11.96 | 3 / 245 | 31% | 0.64 | 156 / 502 |
lung | 5% | 49.75 | 31 / 578 | 24% | 1.09 | 282 / 1155 |
bladder | 0% | 0 | 0 / 21 | 22% | 1.62 | 110 / 504 |
kidney | 2% | 16.40 | 2 / 89 | 10% | 0.23 | 94 / 901 |
thymus | 0% | 5.39 | 3 / 653 | 10% | 0.27 | 59 / 605 |
tonsil | 0% | 0 | 0 / 0 | 7% | 0.10 | 3 / 45 |
heart | 6% | 54.70 | 49 / 861 | 0% | 0 | 0 / 0 |
muscle | 4% | 39.71 | 36 / 803 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 3% | 0.05 | 1 / 29 |
blood vessel | 3% | 53.52 | 45 / 1335 | 0% | 0 | 0 / 0 |
liver | 0% | 0 | 0 / 226 | 2% | 0.07 | 9 / 406 |
spleen | 1% | 6.90 | 2 / 241 | 0% | 0 | 0 / 0 |
peripheral blood | 0% | 3.97 | 4 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0097091 | Biological process | synaptic vesicle clustering |
GO_0017156 | Biological process | calcium-ion regulated exocytosis |
GO_0007268 | Biological process | chemical synaptic transmission |
GO_0007269 | Biological process | neurotransmitter secretion |
GO_0098978 | Cellular component | glutamatergic synapse |
GO_0030672 | Cellular component | synaptic vesicle membrane |
GO_0045202 | Cellular component | synapse |
GO_0098685 | Cellular component | Schaffer collateral - CA1 synapse |
GO_0005886 | Cellular component | plasma membrane |
GO_0014069 | Cellular component | postsynaptic density |
GO_0031201 | Cellular component | SNARE complex |
GO_0042802 | Molecular function | identical protein binding |
GO_0005515 | Molecular function | protein binding |
GO_0005524 | Molecular function | ATP binding |
Gene name | SYN2 |
Protein name | Synapsin II Synapsin-2 (Synapsin II) |
Synonyms | |
Description | FUNCTION: Neuronal phosphoprotein that coats synaptic vesicles, binds to the cytoskeleton, and is believed to function in the regulation of neurotransmitter release. May play a role in noradrenaline secretion by sympathetic neurons (By similarity). . |
Accessions | Q92777 Q86VA8 ENST00000620175.4 [Q92777-2] ENST00000621198.5 [Q92777-1] A0A087WW91 ENST00000425297.2 |