Name | Number of supported studies | Average coverage | |
---|---|---|---|
glutamatergic neuron | 11 studies | 64% ± 25% | |
retinal cone cell | 7 studies | 53% ± 16% | |
retinal rod cell | 7 studies | 43% ± 20% | |
retinal bipolar neuron | 5 studies | 44% ± 14% | |
neuron | 4 studies | 36% ± 14% | |
granule cell | 4 studies | 48% ± 14% | |
retinal ganglion cell | 4 studies | 34% ± 11% | |
Mueller cell | 4 studies | 33% ± 14% | |
endothelial cell of lymphatic vessel | 4 studies | 24% ± 6% | |
endothelial cell | 3 studies | 40% ± 18% | |
OFF-bipolar cell | 3 studies | 49% ± 15% | |
ON-bipolar cell | 3 studies | 54% ± 16% | |
rod bipolar cell | 3 studies | 59% ± 15% | |
GABAergic neuron | 3 studies | 28% ± 3% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 95% | 8129.46 | 2505 / 2642 | 68% | 10.23 | 482 / 705 |
pancreas | 89% | 580.44 | 291 / 328 | 55% | 2.09 | 98 / 178 |
adrenal gland | 55% | 313.52 | 141 / 258 | 74% | 11.99 | 171 / 230 |
breast | 84% | 707.40 | 384 / 459 | 19% | 0.43 | 207 / 1118 |
adipose | 90% | 701.12 | 1088 / 1204 | 0% | 0 | 0 / 0 |
prostate | 38% | 279.42 | 92 / 245 | 37% | 1.10 | 185 / 502 |
intestine | 62% | 352.62 | 603 / 966 | 7% | 0.20 | 35 / 527 |
skin | 24% | 106.34 | 436 / 1809 | 28% | 2.10 | 134 / 472 |
esophagus | 33% | 133.82 | 471 / 1445 | 13% | 0.29 | 23 / 183 |
thymus | 33% | 132.67 | 218 / 653 | 8% | 0.54 | 49 / 605 |
tonsil | 0% | 0 | 0 / 0 | 38% | 2.44 | 17 / 45 |
lung | 12% | 44.27 | 68 / 578 | 20% | 1.14 | 236 / 1155 |
heart | 31% | 173.54 | 264 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 30% | 2.18 | 24 / 80 |
stomach | 17% | 66.86 | 60 / 359 | 11% | 0.30 | 32 / 286 |
bladder | 19% | 102.10 | 4 / 21 | 7% | 0.29 | 34 / 504 |
kidney | 6% | 27.03 | 5 / 89 | 17% | 1.13 | 154 / 901 |
liver | 2% | 9.72 | 5 / 226 | 13% | 0.42 | 52 / 406 |
lymph node | 0% | 0 | 0 / 0 | 14% | 0.27 | 4 / 29 |
blood vessel | 13% | 59.32 | 172 / 1335 | 0% | 0 | 0 / 0 |
muscle | 12% | 43.18 | 93 / 803 | 0% | 0 | 0 / 0 |
uterus | 3% | 10.45 | 5 / 170 | 5% | 0.14 | 22 / 459 |
peripheral blood | 7% | 57.09 | 63 / 929 | 0% | 0 | 0 / 0 |
ovary | 3% | 13.03 | 5 / 180 | 1% | 0.02 | 4 / 430 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spleen | 0% | 0 | 0 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0099509 | Biological process | regulation of presynaptic cytosolic calcium ion concentration |
GO_0007268 | Biological process | chemical synaptic transmission |
GO_2000300 | Biological process | regulation of synaptic vesicle exocytosis |
GO_0055085 | Biological process | transmembrane transport |
GO_0006836 | Biological process | neurotransmitter transport |
GO_0030672 | Cellular component | synaptic vesicle membrane |
GO_0001669 | Cellular component | acrosomal vesicle |
GO_0008021 | Cellular component | synaptic vesicle |
GO_0005886 | Cellular component | plasma membrane |
GO_0016020 | Cellular component | membrane |
GO_0005515 | Molecular function | protein binding |
GO_0022857 | Molecular function | transmembrane transporter activity |
Gene name | SV2B |
Protein name | Synaptic vesicle glycoprotein 2B |
Synonyms | KIAA0735 |
Description | FUNCTION: Probably plays a role in the control of regulated secretion in neural and endocrine cells. .; FUNCTION: (Microbial infection) Receptor for the C.botulinum neurotoxin type A2 (BoNT/A, botA); glycosylation is not essential but enhances the interaction . Probably also serves as a receptor for the closely related C.botulinum neurotoxin type A1. . |
Accessions | ENST00000330276.4 [Q7L1I2-1] ENST00000394232.6 [Q7L1I2-1] Q7L1I2 ENST00000545111.6 [Q7L1I2-2] ENST00000557410.5 [Q7L1I2-1] |