Name | Number of supported studies  | Average coverage | |
|---|---|---|---|
| endothelial cell | 8 studies | 20% ± 5% | |
| retinal ganglion cell | 3 studies | 39% ± 10% | |
| mast cell | 3 studies | 28% ± 10% | |
| basal cell | 3 studies | 18% ± 2% | |
| epithelial cell | 3 studies | 20% ± 7% | |
| GABAergic neuron | 3 studies | 29% ± 9% | |
| glutamatergic neuron | 3 studies | 48% ± 2% |
Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| brain | 4 studies | 27% ± 10% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| adrenal gland | 100% | 2053.75 | 257 / 258 | 97% | 41.49 | 224 / 230 |
| lung | 100% | 3926.60 | 578 / 578 | 97% | 13.25 | 1116 / 1155 |
| esophagus | 97% | 985.89 | 1407 / 1445 | 96% | 15.88 | 176 / 183 |
| stomach | 99% | 1282.98 | 355 / 359 | 91% | 11.91 | 261 / 286 |
| brain | 99% | 2262.43 | 2617 / 2642 | 89% | 10.83 | 630 / 705 |
| uterus | 99% | 1422.53 | 168 / 170 | 88% | 12.49 | 406 / 459 |
| intestine | 94% | 1549.15 | 906 / 966 | 93% | 14.81 | 491 / 527 |
| liver | 100% | 2041.38 | 226 / 226 | 87% | 9.39 | 352 / 406 |
| kidney | 99% | 1119.53 | 88 / 89 | 87% | 9.85 | 786 / 901 |
| prostate | 99% | 2255.40 | 243 / 245 | 83% | 7.75 | 418 / 502 |
| thymus | 100% | 1547.91 | 653 / 653 | 81% | 5.30 | 489 / 605 |
| pancreas | 69% | 419.16 | 226 / 328 | 94% | 9.91 | 167 / 178 |
| bladder | 95% | 888.67 | 20 / 21 | 66% | 9.18 | 331 / 504 |
| ovary | 88% | 1134.51 | 158 / 180 | 66% | 4.00 | 285 / 430 |
| breast | 84% | 590.35 | 384 / 459 | 52% | 2.95 | 578 / 1118 |
| skin | 64% | 1106.60 | 1164 / 1809 | 56% | 5.87 | 265 / 472 |
| spleen | 100% | 1645.08 | 241 / 241 | 0% | 0 | 0 / 0 |
| blood vessel | 99% | 2058.65 | 1327 / 1335 | 0% | 0 | 0 / 0 |
| adipose | 98% | 1027.28 | 1178 / 1204 | 0% | 0 | 0 / 0 |
| tonsil | 0% | 0 | 0 / 0 | 98% | 17.52 | 44 / 45 |
| lymph node | 0% | 0 | 0 / 0 | 93% | 11.56 | 27 / 29 |
| heart | 89% | 1034.91 | 769 / 861 | 0% | 0 | 0 / 0 |
| peripheral blood | 47% | 2111.41 | 441 / 929 | 0% | 0 | 0 / 0 |
| muscle | 8% | 39.78 | 68 / 803 | 0% | 0 | 0 / 0 |
| eye | 0% | 0 | 0 / 0 | 3% | 0.12 | 2 / 80 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
| GO_0070859 | Biological process | positive regulation of bile acid biosynthetic process |
| GO_0010879 | Biological process | cholesterol transport involved in cholesterol storage |
| GO_0032367 | Biological process | intracellular cholesterol transport |
| GO_0070508 | Biological process | cholesterol import |
| GO_0090205 | Biological process | positive regulation of cholesterol metabolic process |
| GO_0005783 | Cellular component | endoplasmic reticulum |
| GO_0005829 | Cellular component | cytosol |
| GO_0031410 | Cellular component | cytoplasmic vesicle |
| GO_0005737 | Cellular component | cytoplasm |
| GO_0015485 | Molecular function | cholesterol binding |
| GO_0005515 | Molecular function | protein binding |
| GO_0120020 | Molecular function | cholesterol transfer activity |
| Gene name | STARD4 |
| Protein name | StAR-related lipid transfer protein 4 (START domain-containing protein 4) (StARD4) START domain containing 4, sterol regulated, isoform CRA_e (StAR related lipid transfer domain containing 4) START domain containing 4, sterol regulated, isoform CRA_c (cDNA, FLJ79512, highly similar to StAR-related lipid transfer protein 4) (cDNA, FLJ79518, highly similar to StAR-related lipid transfer protein 4) StAR related lipid transfer domain containing 4 |
| Synonyms | hCG_37443 |
| Description | FUNCTION: Involved in the intracellular transport of cholesterol. Binds cholesterol or other sterols. . |
| Accessions | D6REN7 ENST00000509887.5 ENST00000511137.5 ENST00000455172.2 ENST00000502322.5 [Q96DR4-2] ENST00000505803.5 [Q96DR4-1] ENST00000512160.5 ENST00000296632.8 [Q96DR4-1] B0AZS2 D6RDM5 Q96DR4 |
