SPMIP6 report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
ciliated cell	20 studies	72% ± 27%	Explore
deuterosomal cell	4 studies	46% ± 13%	Explore
GABAergic neuron	3 studies	27% ± 7%	Explore
glutamatergic neuron	3 studies	31% ± 9%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
brain	3 studies	21% ± 3%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
brain	98%	802.00	2594 / 2642	72%	9.43	509 / 705
kidney	72%	88.06	64 / 89	52%	3.16	470 / 901
lung	61%	551.00	350 / 578	62%	6.80	718 / 1155
intestine	59%	75.11	567 / 966	62%	3.98	327 / 527
ureter	0%	0	0 / 0	100%	1.28	1 / 1
esophagus	56%	119.40	812 / 1445	42%	1.81	77 / 183
prostate	44%	49.38	109 / 245	50%	1.88	252 / 502
heart	93%	293.20	803 / 861	0%	0	0 / 0
stomach	16%	19.84	59 / 359	64%	2.38	183 / 286
ovary	3%	2.54	5 / 180	77%	17.67	329 / 430
adrenal gland	4%	3.79	10 / 258	63%	3.67	144 / 230
bladder	19%	18.57	4 / 21	43%	1.53	216 / 504
uterus	10%	117.60	17 / 170	44%	7.97	201 / 459
pancreas	1%	0.84	3 / 328	52%	3.67	93 / 178
thymus	9%	8.79	56 / 653	20%	0.47	119 / 605
lymph node	0%	0	0 / 0	28%	0.50	8 / 29
liver	0%	0	0 / 226	26%	0.55	105 / 406
breast	8%	8.05	35 / 459	17%	0.45	192 / 1118
tonsil	0%	0	0 / 0	22%	0.89	10 / 45
skin	2%	2.30	41 / 1809	6%	0.14	27 / 472
adipose	6%	6.33	78 / 1204	0%	0	0 / 0
eye	0%	0	0 / 0	4%	0.05	3 / 80
muscle	3%	2.78	21 / 803	0%	0	0 / 0
blood vessel	1%	1.50	19 / 1335	0%	0	0 / 0
peripheral blood	0%	4.14	4 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
spleen	0%	0	0 / 241	0%	0	0 / 0