Name | Number of supported studies | Average coverage | |
---|---|---|---|
glutamatergic neuron | 3 studies | 20% ± 4% |
Insufficient scRNA-seq data for expression of SPATA2 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 2847.85 | 2642 / 2642 | 100% | 33.00 | 705 / 705 |
esophagus | 100% | 881.60 | 1444 / 1445 | 100% | 29.98 | 183 / 183 |
intestine | 100% | 1254.87 | 966 / 966 | 100% | 33.56 | 526 / 527 |
prostate | 100% | 1207.43 | 245 / 245 | 100% | 23.92 | 501 / 502 |
skin | 100% | 957.26 | 1805 / 1809 | 100% | 25.73 | 472 / 472 |
ovary | 100% | 845.68 | 180 / 180 | 100% | 20.23 | 429 / 430 |
stomach | 100% | 872.86 | 358 / 359 | 100% | 33.69 | 286 / 286 |
thymus | 100% | 1707.16 | 653 / 653 | 100% | 18.29 | 602 / 605 |
uterus | 100% | 1036.04 | 170 / 170 | 99% | 17.65 | 456 / 459 |
bladder | 100% | 808.19 | 21 / 21 | 99% | 18.77 | 500 / 504 |
breast | 100% | 779.27 | 457 / 459 | 99% | 23.03 | 1110 / 1118 |
kidney | 100% | 870.52 | 89 / 89 | 99% | 14.24 | 890 / 901 |
lung | 99% | 831.98 | 572 / 578 | 99% | 17.63 | 1147 / 1155 |
pancreas | 99% | 860.42 | 326 / 328 | 99% | 16.72 | 176 / 178 |
adrenal gland | 100% | 1059.32 | 258 / 258 | 97% | 13.77 | 223 / 230 |
liver | 97% | 586.42 | 220 / 226 | 96% | 10.21 | 389 / 406 |
eye | 0% | 0 | 0 / 0 | 100% | 21.00 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 17.26 | 29 / 29 |
muscle | 100% | 1432.76 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 2225.35 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 16.70 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 7.36 | 1 / 1 |
adipose | 99% | 690.23 | 1190 / 1204 | 0% | 0 | 0 / 0 |
heart | 95% | 699.52 | 822 / 861 | 0% | 0 | 0 / 0 |
blood vessel | 94% | 578.47 | 1260 / 1335 | 0% | 0 | 0 / 0 |
peripheral blood | 78% | 821.14 | 723 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0060544 | Biological process | regulation of necroptotic process |
GO_0070266 | Biological process | necroptotic process |
GO_0070536 | Biological process | protein K63-linked deubiquitination |
GO_0007283 | Biological process | spermatogenesis |
GO_0072520 | Biological process | seminiferous tubule development |
GO_0050727 | Biological process | regulation of inflammatory response |
GO_0010803 | Biological process | regulation of tumor necrosis factor-mediated signaling pathway |
GO_1990108 | Biological process | protein linear deubiquitination |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005829 | Cellular component | cytosol |
GO_0005737 | Cellular component | cytoplasm |
GO_0001650 | Cellular component | fibrillar center |
GO_0044877 | Molecular function | protein-containing complex binding |
GO_0030159 | Molecular function | signaling receptor complex adaptor activity |
GO_0005515 | Molecular function | protein binding |
GO_1990381 | Molecular function | ubiquitin-specific protease binding |
Gene name | SPATA2 |
Protein name | Alternative protein SPATA2 Spermatogenesis-associated protein 2 |
Synonyms | KIAA0757 PD1 |
Description | FUNCTION: Bridging factor that mediates the recruitment of CYLD to the LUBAC complex, thereby regulating TNF-alpha-induced necroptosis . Acts as a direct binding intermediate that bridges RNF31/HOIP, the catalytic subunit of the LUBAC complex, and the deubiquitinase (CYLD), thereby recruiting CYLD to the TNF-R1 signaling complex (TNF-RSC) . Required to activate the 'Met-1'- (linear) and 'Lys-63'-linked deubiquitinase activities of CYLD . Controls the kinase activity of RIPK1 and TNF-alpha-induced necroptosis by promoting 'Met-1'-linked deubiquitination of RIPK1 by CYLD (By similarity). . |
Accessions | ENST00000422556.1 L8E7J6 ENST00000289431.10 Q9UM82 |