Name | Number of supported studies | Average coverage | |
---|---|---|---|
plasma cell | 12 studies | 30% ± 12% | |
IgA plasma cell | 4 studies | 21% ± 6% | |
IgG plasma cell | 3 studies | 23% ± 8% |
Insufficient scRNA-seq data for expression of SPAG4 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
kidney | 99% | 262.51 | 88 / 89 | 97% | 46.03 | 876 / 901 |
pancreas | 100% | 1341.03 | 328 / 328 | 96% | 15.75 | 171 / 178 |
ovary | 100% | 641.83 | 180 / 180 | 95% | 21.95 | 409 / 430 |
bladder | 100% | 227.71 | 21 / 21 | 92% | 25.04 | 462 / 504 |
lung | 99% | 229.36 | 570 / 578 | 90% | 17.15 | 1043 / 1155 |
intestine | 100% | 322.90 | 963 / 966 | 83% | 9.21 | 439 / 527 |
stomach | 100% | 263.16 | 358 / 359 | 83% | 8.65 | 238 / 286 |
uterus | 99% | 201.04 | 169 / 170 | 77% | 12.66 | 354 / 459 |
adrenal gland | 100% | 292.93 | 258 / 258 | 76% | 12.76 | 174 / 230 |
breast | 97% | 161.65 | 447 / 459 | 71% | 7.57 | 794 / 1118 |
esophagus | 92% | 118.57 | 1333 / 1445 | 66% | 6.11 | 120 / 183 |
thymus | 95% | 157.21 | 623 / 653 | 62% | 5.62 | 377 / 605 |
liver | 77% | 130.54 | 175 / 226 | 59% | 6.88 | 238 / 406 |
prostate | 100% | 301.58 | 244 / 245 | 24% | 1.69 | 120 / 502 |
skin | 43% | 116.95 | 774 / 1809 | 62% | 7.82 | 291 / 472 |
spleen | 100% | 748.48 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 40.43 | 1 / 1 |
heart | 90% | 121.43 | 776 / 861 | 0% | 0 | 0 / 0 |
brain | 66% | 83.69 | 1743 / 2642 | 22% | 2.77 | 157 / 705 |
adipose | 83% | 131.63 | 999 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 76% | 97.50 | 1020 / 1335 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 71% | 7.82 | 32 / 45 |
lymph node | 0% | 0 | 0 / 0 | 55% | 5.25 | 16 / 29 |
peripheral blood | 50% | 150.55 | 467 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 35% | 2.26 | 28 / 80 |
muscle | 5% | 3.90 | 43 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0007283 | Biological process | spermatogenesis |
GO_0030154 | Biological process | cell differentiation |
GO_0034993 | Cellular component | meiotic nuclear membrane microtubule tethering complex |
GO_0031514 | Cellular component | motile cilium |
GO_0005737 | Cellular component | cytoplasm |
GO_0005856 | Cellular component | cytoskeleton |
GO_0005637 | Cellular component | nuclear inner membrane |
GO_0005635 | Cellular component | nuclear envelope |
GO_0005515 | Molecular function | protein binding |
GO_0043495 | Molecular function | protein-membrane adaptor activity |
GO_0005198 | Molecular function | structural molecule activity |
Gene name | SPAG4 |
Protein name | Sperm-associated antigen 4 protein (Outer dense fiber-associated protein SPAG4) (SUN domain-containing protein 4) Sperm associated antigen 4 |
Synonyms | SUN4 |
Description | FUNCTION: Involved in spermatogenesis. Required for sperm head formation but not required to establish and maintain general polarity of the sperm head. Required for anchoring and organization of the manchette. Required for targeting of SUN3 and probably SYNE1 through a probable SUN1:SYNE3 LINC complex to the nuclear envelope and involved in accurate posterior sperm head localization of the complex. May anchor SUN3 the nuclear envelope. Involved in maintenance of the nuclear envelope integrity. May assist the organization and assembly of outer dense fibers (ODFs), a specific structure of the sperm tail. . |
Accessions | C9JJZ6 Q5JX49 ENST00000430878.1 Q9NPE6 ENST00000374273.8 ENST00000679710.1 ENST00000454819.1 A0A7P0Z4G5 |