Name | Number of supported studies  | Average coverage | |
|---|---|---|---|
| oligodendrocyte | 7 studies | 23% ± 6% | |
| oligodendrocyte precursor cell | 5 studies | 28% ± 9% | |
| GABAergic neuron | 4 studies | 35% ± 11% | |
| astrocyte | 4 studies | 27% ± 10% | |
| glutamatergic neuron | 4 studies | 40% ± 14% | |
| endothelial cell | 3 studies | 24% ± 7% | |
| microglial cell | 3 studies | 18% ± 1% |
Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| brain | 5 studies | 35% ± 10% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| brain | 100% | 708.61 | 2638 / 2642 | 100% | 12.08 | 704 / 705 |
| thymus | 100% | 1019.83 | 653 / 653 | 99% | 12.66 | 600 / 605 |
| prostate | 100% | 685.15 | 245 / 245 | 97% | 7.83 | 489 / 502 |
| lung | 99% | 507.16 | 573 / 578 | 97% | 7.67 | 1126 / 1155 |
| breast | 100% | 641.80 | 459 / 459 | 95% | 7.08 | 1064 / 1118 |
| ovary | 100% | 1253.54 | 180 / 180 | 95% | 6.59 | 408 / 430 |
| esophagus | 98% | 403.31 | 1409 / 1445 | 97% | 8.38 | 178 / 183 |
| uterus | 100% | 825.48 | 170 / 170 | 90% | 5.46 | 413 / 459 |
| pancreas | 97% | 316.75 | 318 / 328 | 92% | 4.82 | 163 / 178 |
| adrenal gland | 99% | 419.66 | 255 / 258 | 89% | 5.65 | 205 / 230 |
| stomach | 99% | 421.55 | 357 / 359 | 88% | 5.26 | 253 / 286 |
| skin | 100% | 484.24 | 1805 / 1809 | 84% | 5.78 | 396 / 472 |
| bladder | 100% | 622.43 | 21 / 21 | 81% | 4.17 | 407 / 504 |
| intestine | 100% | 488.59 | 963 / 966 | 79% | 4.03 | 418 / 527 |
| kidney | 98% | 309.44 | 87 / 89 | 80% | 5.06 | 724 / 901 |
| liver | 86% | 179.26 | 194 / 226 | 46% | 1.95 | 185 / 406 |
| blood vessel | 100% | 587.21 | 1335 / 1335 | 0% | 0 | 0 / 0 |
| spleen | 100% | 680.67 | 241 / 241 | 0% | 0 | 0 / 0 |
| adipose | 100% | 586.28 | 1203 / 1204 | 0% | 0 | 0 / 0 |
| muscle | 100% | 697.70 | 799 / 803 | 0% | 0 | 0 / 0 |
| lymph node | 0% | 0 | 0 / 0 | 97% | 7.95 | 28 / 29 |
| heart | 95% | 344.00 | 822 / 861 | 0% | 0 | 0 / 0 |
| tonsil | 0% | 0 | 0 / 0 | 89% | 6.10 | 40 / 45 |
| peripheral blood | 81% | 479.93 | 756 / 929 | 0% | 0 | 0 / 0 |
| eye | 0% | 0 | 0 / 0 | 38% | 1.44 | 30 / 80 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
| GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
| GO_0005654 | Cellular component | nucleoplasm |
| GO_0005829 | Cellular component | cytosol |
| GO_0000785 | Cellular component | chromatin |
| GO_0000978 | Molecular function | RNA polymerase II cis-regulatory region sequence-specific DNA binding |
| GO_0042802 | Molecular function | identical protein binding |
| GO_0005515 | Molecular function | protein binding |
| GO_0000981 | Molecular function | DNA-binding transcription factor activity, RNA polymerase II-specific |
| GO_0043565 | Molecular function | sequence-specific DNA binding |
| GO_0046872 | Molecular function | metal ion binding |
| Gene name | SP4 |
| Protein name | SP4 protein Transcription factor Sp4 (SPR-1) Sp4 transcription factor Alternative protein SP4 |
| Synonyms | |
| Description | FUNCTION: Binds to GT and GC boxes promoters elements. Probable transcriptional activator. |
| Accessions | ENST00000649633.1 C9JUS7 A0A3B3IRW4 ENST00000432066.2 Q32M51 Q02446 F8WB93 ENST00000222584.8 ENST00000448246.1 L0R552 |
