Insufficient scRNA-seq data for expression of SOHLH2 at single-cell level.
Insufficient scRNA-seq data for expression of SOHLH2 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
prostate | 94% | 81.64 | 231 / 245 | 22% | 0.60 | 108 / 502 |
brain | 88% | 85.48 | 2335 / 2642 | 23% | 0.42 | 159 / 705 |
bladder | 90% | 99.43 | 19 / 21 | 13% | 0.53 | 68 / 504 |
adrenal gland | 91% | 50.79 | 235 / 258 | 3% | 0.03 | 6 / 230 |
kidney | 80% | 43.22 | 71 / 89 | 3% | 0.04 | 25 / 901 |
uterus | 65% | 35.24 | 110 / 170 | 11% | 0.42 | 50 / 459 |
intestine | 72% | 124.55 | 700 / 966 | 2% | 0.08 | 13 / 527 |
esophagus | 59% | 35.99 | 847 / 1445 | 13% | 0.78 | 24 / 183 |
muscle | 69% | 39.11 | 558 / 803 | 0% | 0 | 0 / 0 |
stomach | 57% | 24.97 | 204 / 359 | 7% | 0.35 | 20 / 286 |
thymus | 56% | 23.17 | 366 / 653 | 1% | 0.02 | 7 / 605 |
breast | 53% | 16.64 | 242 / 459 | 4% | 0.13 | 40 / 1118 |
heart | 54% | 26.39 | 466 / 861 | 0% | 0 | 0 / 0 |
ovary | 37% | 15.86 | 67 / 180 | 5% | 0.14 | 20 / 430 |
adipose | 39% | 10.46 | 470 / 1204 | 0% | 0 | 0 / 0 |
skin | 35% | 19.40 | 637 / 1809 | 2% | 0.06 | 11 / 472 |
blood vessel | 36% | 11.76 | 477 / 1335 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 31% | 0.50 | 25 / 80 |
lung | 11% | 2.26 | 66 / 578 | 9% | 0.62 | 101 / 1155 |
pancreas | 9% | 1.68 | 30 / 328 | 2% | 0.04 | 3 / 178 |
liver | 0% | 0.26 | 1 / 226 | 8% | 0.36 | 34 / 406 |
spleen | 4% | 0.53 | 9 / 241 | 0% | 0 | 0 / 0 |
peripheral blood | 1% | 0.15 | 6 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 45 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0007283 | Biological process | spermatogenesis |
GO_0030154 | Biological process | cell differentiation |
GO_0009994 | Biological process | oocyte differentiation |
GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
GO_0000785 | Cellular component | chromatin |
GO_0005737 | Cellular component | cytoplasm |
GO_0005634 | Cellular component | nucleus |
GO_0046982 | Molecular function | protein heterodimerization activity |
GO_0042803 | Molecular function | protein homodimerization activity |
GO_1990837 | Molecular function | sequence-specific double-stranded DNA binding |
GO_0000978 | Molecular function | RNA polymerase II cis-regulatory region sequence-specific DNA binding |
GO_0000981 | Molecular function | DNA-binding transcription factor activity, RNA polymerase II-specific |
Gene name | SOHLH2 |
Protein name | Spermatogenesis- and oogenesis-specific basic helix-loop-helix-containing protein 2 |
Synonyms | TEB1 |
Description | FUNCTION: Transcription regulator of both male and female germline differentiation. Suppresses genes involved in spermatogonial stem cells maintenance, and induces genes important for spermatogonial differentiation. Coordinates oocyte differentiation without affecting meiosis I (By similarity). . |
Accessions | ENST00000379881.8 [Q9NX45-1] Q9NX45 ENST00000317764.6 [Q9NX45-2] |