Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| epithelial cell | 6 studies | 29% ± 10% | |
| oligodendrocyte precursor cell | 6 studies | 28% ± 12% | |
| ciliated cell | 5 studies | 27% ± 6% | |
| basal cell | 4 studies | 25% ± 7% | |
| neuron | 4 studies | 46% ± 21% | |
| fibroblast | 4 studies | 19% ± 2% | |
| astrocyte | 4 studies | 34% ± 11% | |
| glutamatergic neuron | 4 studies | 39% ± 12% | |
| GABAergic neuron | 3 studies | 34% ± 2% | |
| intestinal crypt stem cell | 3 studies | 22% ± 5% | |
| transit amplifying cell | 3 studies | 25% ± 9% | |
| pericyte | 3 studies | 17% ± 2% | |
| connective tissue cell | 3 studies | 32% ± 15% |
Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| brain | 3 studies | 34% ± 8% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| intestine | 100% | 1511.79 | 966 / 966 | 100% | 51.84 | 525 / 527 |
| stomach | 100% | 847.55 | 358 / 359 | 100% | 50.74 | 285 / 286 |
| esophagus | 100% | 1262.86 | 1445 / 1445 | 99% | 34.82 | 181 / 183 |
| kidney | 100% | 1219.51 | 89 / 89 | 98% | 53.26 | 884 / 901 |
| bladder | 100% | 1339.76 | 21 / 21 | 97% | 47.62 | 491 / 504 |
| uterus | 100% | 1321.02 | 170 / 170 | 97% | 52.60 | 447 / 459 |
| breast | 100% | 1269.36 | 459 / 459 | 97% | 39.85 | 1084 / 1118 |
| ovary | 100% | 684.23 | 180 / 180 | 97% | 27.04 | 416 / 430 |
| lung | 99% | 833.07 | 573 / 578 | 97% | 35.13 | 1125 / 1155 |
| pancreas | 97% | 625.30 | 317 / 328 | 99% | 44.25 | 177 / 178 |
| thymus | 100% | 854.19 | 651 / 653 | 96% | 27.27 | 580 / 605 |
| skin | 100% | 1388.12 | 1802 / 1809 | 88% | 34.09 | 415 / 472 |
| prostate | 100% | 978.27 | 245 / 245 | 86% | 16.05 | 431 / 502 |
| adrenal gland | 99% | 1003.84 | 256 / 258 | 86% | 21.50 | 198 / 230 |
| brain | 80% | 474.06 | 2126 / 2642 | 99% | 42.55 | 701 / 705 |
| liver | 93% | 447.72 | 210 / 226 | 79% | 20.64 | 321 / 406 |
| adipose | 100% | 1374.90 | 1204 / 1204 | 0% | 0 | 0 / 0 |
| blood vessel | 100% | 2194.96 | 1335 / 1335 | 0% | 0 | 0 / 0 |
| ureter | 0% | 0 | 0 / 0 | 100% | 9.81 | 1 / 1 |
| tonsil | 0% | 0 | 0 / 0 | 96% | 38.17 | 43 / 45 |
| heart | 94% | 818.14 | 812 / 861 | 0% | 0 | 0 / 0 |
| spleen | 92% | 390.87 | 221 / 241 | 0% | 0 | 0 / 0 |
| eye | 0% | 0 | 0 / 0 | 63% | 9.94 | 50 / 80 |
| muscle | 39% | 206.70 | 314 / 803 | 0% | 0 | 0 / 0 |
| lymph node | 0% | 0 | 0 / 0 | 21% | 6.92 | 6 / 29 |
| peripheral blood | 1% | 4.80 | 9 / 929 | 0% | 0 | 0 / 0 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| GO_0000422 | Biological process | autophagy of mitochondrion |
| GO_0015031 | Biological process | protein transport |
| GO_0034727 | Biological process | piecemeal microautophagy of the nucleus |
| GO_0061709 | Biological process | reticulophagy |
| GO_2000786 | Biological process | positive regulation of autophagosome assembly |
| GO_0032456 | Biological process | endocytic recycling |
| GO_0031901 | Cellular component | early endosome membrane |
| GO_0000407 | Cellular component | phagophore assembly site |
| GO_0005769 | Cellular component | early endosome |
| GO_0005515 | Molecular function | protein binding |
| GO_0035091 | Molecular function | phosphatidylinositol binding |
| Gene name | SNX7 |
| Protein name | Sorting nexin 7 Sorting nexin-7 |
| Synonyms | |
| Description | FUNCTION: Involved in the regulation of endocytosis and in several stages of intracellular trafficking . Together with SNX4, involved in autophagosome assembly by regulating trafficking and recycling of phospholipid scramblase ATG9A . . |
| Accessions | B7ZC83 ENST00000306121.8 [Q9UNH6-3] ENST00000529992.5 ENST00000454199.1 E9PLE1 E9PNL2 Q9UNH6 ENST00000528824.1 |