Name | Number of supported studies | Average coverage | |
---|---|---|---|
adipocyte | 8 studies | 26% ± 4% | |
endothelial cell of lymphatic vessel | 7 studies | 60% ± 15% | |
endothelial cell | 6 studies | 28% ± 11% | |
retina horizontal cell | 6 studies | 58% ± 33% | |
glutamatergic neuron | 4 studies | 31% ± 12% | |
interneuron | 3 studies | 22% ± 9% | |
vein endothelial cell | 3 studies | 46% ± 28% | |
endothelial cell of vascular tree | 3 studies | 50% ± 17% | |
GABAergic neuron | 3 studies | 29% ± 9% |
Insufficient scRNA-seq data for expression of SNTG2 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
uterus | 99% | 234.56 | 169 / 170 | 9% | 0.19 | 40 / 459 |
breast | 99% | 275.44 | 455 / 459 | 8% | 0.19 | 94 / 1118 |
pancreas | 99% | 187.86 | 324 / 328 | 7% | 0.11 | 13 / 178 |
thymus | 98% | 125.33 | 643 / 653 | 5% | 0.11 | 28 / 605 |
spleen | 100% | 411.18 | 241 / 241 | 0% | 0 | 0 / 0 |
adipose | 99% | 241.41 | 1197 / 1204 | 0% | 0 | 0 / 0 |
bladder | 95% | 107.67 | 20 / 21 | 1% | 0.03 | 7 / 504 |
prostate | 84% | 103.55 | 207 / 245 | 8% | 0.13 | 40 / 502 |
esophagus | 89% | 90.95 | 1286 / 1445 | 2% | 0.02 | 3 / 183 |
intestine | 83% | 79.09 | 803 / 966 | 1% | 0.02 | 4 / 527 |
lung | 72% | 63.06 | 415 / 578 | 4% | 0.07 | 41 / 1155 |
skin | 72% | 115.21 | 1295 / 1809 | 0% | 0.01 | 2 / 472 |
blood vessel | 58% | 56.79 | 768 / 1335 | 0% | 0 | 0 / 0 |
stomach | 55% | 39.05 | 196 / 359 | 2% | 0.03 | 5 / 286 |
brain | 51% | 34.78 | 1354 / 2642 | 4% | 0.10 | 25 / 705 |
muscle | 52% | 32.18 | 415 / 803 | 0% | 0 | 0 / 0 |
ovary | 28% | 17.38 | 51 / 180 | 2% | 0.04 | 10 / 430 |
adrenal gland | 21% | 17.35 | 53 / 258 | 6% | 0.11 | 13 / 230 |
heart | 26% | 15.50 | 221 / 861 | 0% | 0 | 0 / 0 |
kidney | 16% | 7.07 | 14 / 89 | 5% | 0.11 | 46 / 901 |
tonsil | 0% | 0 | 0 / 0 | 11% | 0.20 | 5 / 45 |
lymph node | 0% | 0 | 0 / 0 | 3% | 0.10 | 1 / 29 |
peripheral blood | 3% | 1.92 | 31 / 929 | 0% | 0 | 0 / 0 |
liver | 0% | 0 | 0 / 226 | 0% | 0.00 | 1 / 406 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 80 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0007417 | Biological process | central nervous system development |
GO_0042383 | Cellular component | sarcolemma |
GO_0005856 | Cellular component | cytoskeleton |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005622 | Cellular component | intracellular anatomical structure |
GO_0016013 | Cellular component | syntrophin complex |
GO_0016010 | Cellular component | dystrophin-associated glycoprotein complex |
GO_0005886 | Cellular component | plasma membrane |
GO_0005737 | Cellular component | cytoplasm |
GO_0030165 | Molecular function | PDZ domain binding |
GO_0003779 | Molecular function | actin binding |
GO_0097109 | Molecular function | neuroligin family protein binding |
GO_0005515 | Molecular function | protein binding |
GO_0005198 | Molecular function | structural molecule activity |
Gene name | SNTG2 |
Protein name | Gamma-2-syntrophin (G2SYN) (Syntrophin-5) (SYN5) Gamma-2-syntrophin Syntrophin gamma 2 |
Synonyms | |
Description | FUNCTION: Adapter protein that binds to and probably organizes the subcellular localization of a variety of proteins. May link various receptors to the actin cytoskeleton and the dystrophin glycoprotein complex (By similarity). . |
Accessions | ENST00000308624.10 [Q9NY99-1] ENST00000625507.1 A0A0G2JR78 A0A0G2JS85 ENST00000627224.1 F2Z2D2 ENST00000627321.2 ENST00000452177.5 ENST00000407292.1 [Q9NY99-2] Q9NY99 ENST00000450962.5 |