Name | Number of supported studies | Average coverage | |
---|---|---|---|
GABAergic neuron | 3 studies | 27% ± 3% | |
glutamatergic neuron | 3 studies | 26% ± 3% | |
oligodendrocyte precursor cell | 3 studies | 28% ± 4% |
Insufficient scRNA-seq data for expression of SLITRK3 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 97% | 858.12 | 2556 / 2642 | 97% | 25.32 | 687 / 705 |
uterus | 92% | 927.58 | 156 / 170 | 7% | 0.52 | 31 / 459 |
esophagus | 80% | 979.14 | 1153 / 1445 | 14% | 0.58 | 25 / 183 |
liver | 64% | 431.38 | 144 / 226 | 12% | 0.79 | 47 / 406 |
intestine | 61% | 391.76 | 592 / 966 | 5% | 0.13 | 27 / 527 |
prostate | 25% | 86.24 | 62 / 245 | 22% | 0.51 | 110 / 502 |
stomach | 25% | 61.86 | 88 / 359 | 5% | 0.18 | 14 / 286 |
bladder | 19% | 63.00 | 4 / 21 | 7% | 0.23 | 33 / 504 |
pancreas | 0% | 0 | 0 / 328 | 21% | 0.47 | 38 / 178 |
ovary | 15% | 126.03 | 27 / 180 | 2% | 0.05 | 10 / 430 |
lung | 10% | 19.24 | 59 / 578 | 6% | 0.29 | 70 / 1155 |
adrenal gland | 0% | 0.86 | 1 / 258 | 7% | 0.30 | 16 / 230 |
breast | 3% | 6.29 | 15 / 459 | 2% | 0.34 | 17 / 1118 |
blood vessel | 4% | 7.39 | 55 / 1335 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 2% | 0.07 | 1 / 45 |
skin | 0% | 0.86 | 9 / 1809 | 2% | 0.12 | 8 / 472 |
heart | 2% | 3.79 | 16 / 861 | 0% | 0 | 0 / 0 |
thymus | 1% | 1.06 | 4 / 653 | 1% | 0.02 | 6 / 605 |
eye | 0% | 0 | 0 / 0 | 1% | 0.04 | 1 / 80 |
adipose | 0% | 0.69 | 5 / 1204 | 0% | 0 | 0 / 0 |
spleen | 0% | 2.58 | 1 / 241 | 0% | 0 | 0 / 0 |
kidney | 0% | 0 | 0 / 89 | 0% | 0.02 | 1 / 901 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
muscle | 0% | 0 | 0 / 803 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
peripheral blood | 0% | 0 | 0 / 929 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0007409 | Biological process | axonogenesis |
GO_0072578 | Biological process | neurotransmitter-gated ion channel clustering |
GO_0072553 | Biological process | terminal button organization |
GO_0051932 | Biological process | synaptic transmission, GABAergic |
GO_0099560 | Biological process | synaptic membrane adhesion |
GO_1905606 | Biological process | regulation of presynapse assembly |
GO_0051965 | Biological process | positive regulation of synapse assembly |
GO_0097116 | Biological process | gephyrin clustering involved in postsynaptic density assembly |
GO_0099634 | Cellular component | postsynaptic specialization membrane |
GO_0098982 | Cellular component | GABA-ergic synapse |
GO_0009986 | Cellular component | cell surface |
GO_0098839 | Cellular component | postsynaptic density membrane |
GO_0005886 | Cellular component | plasma membrane |
GO_0005515 | Molecular function | protein binding |
Gene name | SLITRK3 |
Protein name | SLIT and NTRK-like protein 3 SLIT and NTRK like family member 3 |
Synonyms | KIAA0848 |
Description | FUNCTION: Suppresses neurite outgrowth. . |
Accessions | ENST00000497724.1 ENST00000241274.3 ENST00000475390.2 C9K0R4 O94933 |