Name | Number of supported studies  | Average coverage | |
|---|---|---|---|
| glutamatergic neuron | 5 studies | 42% ± 24% | |
| macrophage | 5 studies | 26% ± 8% | |
| mast cell | 4 studies | 21% ± 4% | |
| oligodendrocyte precursor cell | 4 studies | 27% ± 6% | |
| GABAergic neuron | 3 studies | 41% ± 11% |
Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| brain | 5 studies | 33% ± 19% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| esophagus | 100% | 1220.42 | 1445 / 1445 | 100% | 16.20 | 183 / 183 |
| bladder | 100% | 1712.81 | 21 / 21 | 99% | 9.83 | 500 / 504 |
| prostate | 100% | 2073.65 | 244 / 245 | 100% | 34.80 | 500 / 502 |
| intestine | 100% | 2695.91 | 964 / 966 | 99% | 11.65 | 523 / 527 |
| stomach | 99% | 1010.37 | 356 / 359 | 99% | 13.32 | 284 / 286 |
| lung | 100% | 1704.85 | 576 / 578 | 99% | 11.00 | 1138 / 1155 |
| skin | 99% | 1128.22 | 1791 / 1809 | 99% | 11.79 | 468 / 472 |
| uterus | 100% | 1131.43 | 170 / 170 | 98% | 9.32 | 449 / 459 |
| breast | 99% | 1205.39 | 455 / 459 | 98% | 10.14 | 1092 / 1118 |
| kidney | 100% | 1126.25 | 89 / 89 | 95% | 10.34 | 852 / 901 |
| pancreas | 98% | 995.49 | 321 / 328 | 97% | 12.54 | 172 / 178 |
| adrenal gland | 98% | 1115.69 | 252 / 258 | 95% | 13.60 | 219 / 230 |
| thymus | 99% | 964.10 | 649 / 653 | 92% | 5.70 | 557 / 605 |
| brain | 91% | 2463.18 | 2409 / 2642 | 99% | 8.88 | 697 / 705 |
| ovary | 100% | 893.11 | 180 / 180 | 82% | 4.84 | 354 / 430 |
| liver | 65% | 379.04 | 146 / 226 | 73% | 4.13 | 296 / 406 |
| spleen | 100% | 2425.25 | 241 / 241 | 0% | 0 | 0 / 0 |
| tonsil | 0% | 0 | 0 / 0 | 100% | 10.90 | 45 / 45 |
| adipose | 100% | 1524.91 | 1202 / 1204 | 0% | 0 | 0 / 0 |
| blood vessel | 99% | 1169.23 | 1325 / 1335 | 0% | 0 | 0 / 0 |
| peripheral blood | 97% | 2619.61 | 897 / 929 | 0% | 0 | 0 / 0 |
| lymph node | 0% | 0 | 0 / 0 | 97% | 8.88 | 28 / 29 |
| muscle | 96% | 1130.71 | 769 / 803 | 0% | 0 | 0 / 0 |
| eye | 0% | 0 | 0 / 0 | 93% | 5.65 | 74 / 80 |
| heart | 82% | 541.07 | 702 / 861 | 0% | 0 | 0 / 0 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
| GO_0006811 | Biological process | monoatomic ion transport |
| GO_0015734 | Biological process | taurine transmembrane transport |
| GO_0032328 | Biological process | alanine transport |
| GO_0089718 | Biological process | amino acid import across plasma membrane |
| GO_0015808 | Biological process | L-alanine transport |
| GO_0015816 | Biological process | glycine transport |
| GO_0015824 | Biological process | proline transport |
| GO_0006865 | Biological process | amino acid transport |
| GO_0035524 | Biological process | proline transmembrane transport |
| GO_1902600 | Biological process | proton transmembrane transport |
| GO_0016324 | Cellular component | apical plasma membrane |
| GO_0005886 | Cellular component | plasma membrane |
| GO_0005783 | Cellular component | endoplasmic reticulum |
| GO_0005774 | Cellular component | vacuolar membrane |
| GO_0005765 | Cellular component | lysosomal membrane |
| GO_0015171 | Molecular function | amino acid transmembrane transporter activity |
| GO_0015193 | Molecular function | L-proline transmembrane transporter activity |
| GO_0015180 | Molecular function | L-alanine transmembrane transporter activity |
| GO_0005297 | Molecular function | proline:proton symporter activity |
| GO_0005368 | Molecular function | taurine transmembrane transporter activity |
| GO_0015187 | Molecular function | glycine transmembrane transporter activity |
| GO_0005280 | Molecular function | amino acid:proton symporter activity |
| GO_0022858 | Molecular function | alanine transmembrane transporter activity |
| GO_0005515 | Molecular function | protein binding |
| Gene name | SLC36A1 |
| Protein name | Proton-coupled amino acid transporter 1 (Proton/amino acid transporter 1) (hPAT1) (Solute carrier family 36 member 1) Solute carrier family 36 member 1 |
| Synonyms | PAT1 |
| Description | FUNCTION: Electrogenic proton/amino acid symporter with selectivity for small apolar L-amino acids, their D-enantiomers and selected amino acid derivatives such as 4-aminobutanoate/GABA . May be involved in the efflux from the lysosomal compartment of neutral amino acids resulting from proteolysis (By similarity). May play a role in specifying sites for exocytosis in neurons (By similarity). . |
| Accessions | ENST00000517628.1 ENST00000243389.8 [Q7Z2H8-1] ENST00000429484.6 [Q7Z2H8-4] ENST00000521925.5 ENST00000520701.5 [Q7Z2H8-1] Q7Z2H8 ENST00000520111.5 E5RG64 ENST00000522185.1 E5RI40 ENST00000517945.5 H0YB60 ENST00000519829.2 H0YBS2 E5RHG5 E7EW39 |
