Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 12 studies | 27% ± 10% | |
oligodendrocyte precursor cell | 10 studies | 31% ± 17% | |
astrocyte | 10 studies | 27% ± 13% | |
oligodendrocyte | 10 studies | 29% ± 11% | |
fibroblast | 9 studies | 21% ± 7% | |
GABAergic neuron | 8 studies | 34% ± 17% | |
epithelial cell | 8 studies | 33% ± 12% | |
interneuron | 6 studies | 36% ± 23% | |
microglial cell | 6 studies | 25% ± 8% | |
glutamatergic neuron | 5 studies | 46% ± 21% | |
macrophage | 5 studies | 28% ± 7% | |
pericyte | 5 studies | 20% ± 5% | |
smooth muscle cell | 5 studies | 21% ± 3% | |
type II pneumocyte | 4 studies | 19% ± 5% | |
monocyte | 4 studies | 17% ± 2% | |
endothelial cell of lymphatic vessel | 4 studies | 24% ± 6% | |
type I pneumocyte | 4 studies | 20% ± 5% | |
basal cell | 4 studies | 35% ± 18% | |
GABAergic interneuron | 3 studies | 20% ± 4% | |
granule cell | 3 studies | 21% ± 5% | |
mesothelial cell | 3 studies | 27% ± 9% | |
ciliated cell | 3 studies | 31% ± 4% | |
abnormal cell | 3 studies | 26% ± 13% | |
ependymal cell | 3 studies | 28% ± 11% | |
goblet cell | 3 studies | 37% ± 22% | |
transit amplifying cell | 3 studies | 32% ± 24% | |
adipocyte | 3 studies | 19% ± 3% | |
neuron | 3 studies | 47% ± 17% | |
mast cell | 3 studies | 18% ± 2% | |
kidney loop of Henle epithelial cell | 3 studies | 24% ± 5% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 1903.75 | 1445 / 1445 | 100% | 28.20 | 183 / 183 |
ovary | 100% | 2355.74 | 180 / 180 | 100% | 18.08 | 428 / 430 |
lung | 100% | 1837.58 | 576 / 578 | 100% | 28.36 | 1153 / 1155 |
kidney | 100% | 2749.40 | 89 / 89 | 99% | 38.32 | 896 / 901 |
pancreas | 100% | 2152.71 | 328 / 328 | 99% | 22.64 | 177 / 178 |
breast | 100% | 1954.88 | 459 / 459 | 99% | 27.67 | 1110 / 1118 |
prostate | 100% | 1779.18 | 245 / 245 | 99% | 33.17 | 496 / 502 |
intestine | 100% | 1947.68 | 966 / 966 | 98% | 23.45 | 518 / 527 |
stomach | 100% | 1800.28 | 359 / 359 | 98% | 23.80 | 281 / 286 |
thymus | 100% | 3049.42 | 653 / 653 | 98% | 30.28 | 591 / 605 |
bladder | 100% | 1698.52 | 21 / 21 | 98% | 18.68 | 492 / 504 |
brain | 98% | 949.05 | 2588 / 2642 | 99% | 14.73 | 700 / 705 |
adrenal gland | 100% | 7192.92 | 258 / 258 | 97% | 20.96 | 223 / 230 |
uterus | 100% | 1966.64 | 170 / 170 | 97% | 16.74 | 443 / 459 |
skin | 100% | 3408.70 | 1809 / 1809 | 93% | 18.67 | 439 / 472 |
liver | 100% | 1420.50 | 226 / 226 | 93% | 14.27 | 376 / 406 |
muscle | 100% | 1978.01 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 1259.70 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 6.01 | 1 / 1 |
adipose | 100% | 2042.10 | 1203 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 2137.28 | 1333 / 1335 | 0% | 0 | 0 / 0 |
heart | 98% | 1929.10 | 843 / 861 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 93% | 13.76 | 42 / 45 |
eye | 0% | 0 | 0 / 0 | 68% | 10.03 | 54 / 80 |
lymph node | 0% | 0 | 0 / 0 | 66% | 6.02 | 19 / 29 |
peripheral blood | 53% | 564.19 | 493 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0016020 | Cellular component | membrane |
Gene name | SLC35F5 |
Protein name | Solute carrier family 35 member F5 Solute carrier family 35 member F5 (Hepatitis C virus NS5A-transactivated protein 3) (HCV NS5A-transactivated protein 3) |
Synonyms | hCG_27227 UNQ2545/PRO6097 NS5ATP3 |
Description | FUNCTION: Putative solute transporter. . FUNCTION: Putative solute transporter. . FUNCTION: Putative solute transporter. . FUNCTION: Putative solute transporter. . |
Accessions | H7C0S5 H7C2I7 ENST00000245680.7 [Q8WV83-1] ENST00000409106.5 ENST00000409342.1 ENST00000447673.1 Q8WV83 ENST00000420066.1 B8ZZV6 B8ZZY4 |