Name | Number of supported studies | Average coverage | |
---|---|---|---|
astrocyte | 13 studies | 32% ± 13% | |
oligodendrocyte | 11 studies | 29% ± 9% | |
adipocyte | 8 studies | 25% ± 9% | |
endothelial cell | 5 studies | 19% ± 6% | |
oligodendrocyte precursor cell | 5 studies | 25% ± 8% | |
cardiac muscle cell | 4 studies | 24% ± 2% | |
GABAergic neuron | 4 studies | 34% ± 14% | |
glutamatergic neuron | 4 studies | 35% ± 16% | |
macrophage | 4 studies | 21% ± 3% | |
epithelial cell | 3 studies | 29% ± 8% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 8 studies | 28% ± 14% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 4148.88 | 2641 / 2642 | 100% | 25.51 | 705 / 705 |
skin | 100% | 2331.17 | 1805 / 1809 | 100% | 34.29 | 472 / 472 |
prostate | 100% | 4714.56 | 245 / 245 | 100% | 19.96 | 500 / 502 |
thymus | 100% | 3488.25 | 653 / 653 | 99% | 22.75 | 600 / 605 |
adrenal gland | 100% | 4412.45 | 258 / 258 | 99% | 18.15 | 227 / 230 |
ovary | 100% | 5872.06 | 180 / 180 | 99% | 21.92 | 424 / 430 |
kidney | 100% | 1849.73 | 89 / 89 | 98% | 15.06 | 887 / 901 |
breast | 100% | 3852.39 | 459 / 459 | 98% | 15.93 | 1091 / 1118 |
pancreas | 99% | 1535.46 | 326 / 328 | 97% | 17.74 | 173 / 178 |
esophagus | 99% | 2099.66 | 1437 / 1445 | 92% | 11.17 | 168 / 183 |
lung | 99% | 2106.45 | 573 / 578 | 90% | 9.83 | 1042 / 1155 |
uterus | 100% | 3631.13 | 170 / 170 | 86% | 9.99 | 394 / 459 |
bladder | 100% | 2624.29 | 21 / 21 | 83% | 7.65 | 417 / 504 |
stomach | 100% | 2038.75 | 358 / 359 | 80% | 7.89 | 228 / 286 |
intestine | 98% | 2173.18 | 945 / 966 | 81% | 7.42 | 426 / 527 |
liver | 82% | 698.63 | 185 / 226 | 57% | 5.85 | 233 / 406 |
adipose | 100% | 3535.75 | 1204 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 60.64 | 80 / 80 |
spleen | 100% | 2060.08 | 241 / 241 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 2032.19 | 1330 / 1335 | 0% | 0 | 0 / 0 |
muscle | 100% | 2681.58 | 799 / 803 | 0% | 0 | 0 / 0 |
heart | 99% | 3180.51 | 851 / 861 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 97% | 8.42 | 28 / 29 |
tonsil | 0% | 0 | 0 / 0 | 91% | 8.82 | 41 / 45 |
peripheral blood | 63% | 657.68 | 584 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_1905135 | Biological process | biotin import across plasma membrane |
GO_0031652 | Biological process | positive regulation of heat generation |
GO_0015909 | Biological process | long-chain fatty acid transport |
GO_0150104 | Biological process | transport across blood-brain barrier |
GO_0033211 | Biological process | adiponectin-activated signaling pathway |
GO_0006656 | Biological process | phosphatidylcholine biosynthetic process |
GO_0006659 | Biological process | phosphatidylserine biosynthetic process |
GO_0010867 | Biological process | positive regulation of triglyceride biosynthetic process |
GO_0015878 | Biological process | biotin transport |
GO_0006661 | Biological process | phosphatidylinositol biosynthetic process |
GO_0044381 | Biological process | glucose import in response to insulin stimulus |
GO_0140115 | Biological process | export across plasma membrane |
GO_0015911 | Biological process | long-chain fatty acid import across plasma membrane |
GO_0044539 | Biological process | long-chain fatty acid import into cell |
GO_0009409 | Biological process | response to cold |
GO_0001676 | Biological process | long-chain fatty acid metabolic process |
GO_0001579 | Biological process | medium-chain fatty acid transport |
GO_0032049 | Biological process | cardiolipin biosynthetic process |
GO_0006654 | Biological process | phosphatidic acid biosynthetic process |
GO_0071072 | Biological process | negative regulation of phospholipid biosynthetic process |
GO_0006655 | Biological process | phosphatidylglycerol biosynthetic process |
GO_1990379 | Biological process | lipid transport across blood-brain barrier |
GO_0006646 | Biological process | phosphatidylethanolamine biosynthetic process |
GO_0005886 | Cellular component | plasma membrane |
GO_0016020 | Cellular component | membrane |
GO_0005789 | Cellular component | endoplasmic reticulum membrane |
GO_0009925 | Cellular component | basal plasma membrane |
GO_0005743 | Cellular component | mitochondrial inner membrane |
GO_0005783 | Cellular component | endoplasmic reticulum |
GO_0005324 | Molecular function | long-chain fatty acid transmembrane transporter activity |
GO_0015562 | Molecular function | efflux transmembrane transporter activity |
GO_0015245 | Molecular function | fatty acid transmembrane transporter activity |
GO_0031957 | Molecular function | very long-chain fatty acid-CoA ligase activity |
GO_0004467 | Molecular function | long-chain fatty acid-CoA ligase activity |
GO_0015225 | Molecular function | biotin transmembrane transporter activity |
GO_0090434 | Molecular function | oleoyl-CoA ligase activity |
GO_0042802 | Molecular function | identical protein binding |
GO_0000166 | Molecular function | nucleotide binding |
GO_0043539 | Molecular function | protein serine/threonine kinase activator activity |
GO_0047676 | Molecular function | arachidonate-CoA ligase activity |
GO_0005515 | Molecular function | protein binding |
GO_1901480 | Molecular function | oleate transmembrane transporter activity |
Gene name | SLC27A1 |
Protein name | Long-chain fatty acid transport protein 1 (Arachidonate--CoA ligase) (EC 6.2.1.15) (Fatty acid transport protein 1) (FATP-1) (Long-chain-fatty-acid--CoA ligase) (EC 6.2.1.3) (Solute carrier family 27 member 1) (Very long-chain acyl-CoA synthetase) (EC 6.2.1.-) Long-chain-fatty-acid--CoA ligase Solute carrier family 27 member 1 |
Synonyms | ACSVL5 FATP1 |
Description | FUNCTION: Mediates the import of long-chain fatty acids (LCFA) into the cell by facilitating their transport at the plasma membrane . Also functions as an acyl-CoA ligase catalyzing the ATP-dependent formation of fatty acyl-CoA using LCFA and very-long-chain fatty acids (VLCFA) as substrates, which prevents fatty acid efflux from cells and might drive more fatty acid uptake. May act directly as a bona fide transporter, or alternatively, in a cytoplasmic or membrane-associated multimeric protein complex to trap and draw fatty acids towards accumulation. Plays a pivotal role in regulating available LCFA substrates from exogenous sources in tissues undergoing high levels of beta-oxidation or triglyceride synthesis. May be involved in regulation of cholesterol metabolism (By similarity). Probably involved in fatty acid transport across the blood barrier . . |
Accessions | Q6PCB7 ENST00000599380.5 ENST00000600277.5 Q96DY3 B7Z225 M0QZC9 M0QXY2 ENST00000599965.1 ENST00000598424.5 [Q6PCB7-2] ENST00000252595.12 [Q6PCB7-1] ENST00000600297.1 |