Name | Number of supported studies | Average coverage | |
---|---|---|---|
astrocyte | 14 studies | 35% ± 16% | |
oligodendrocyte precursor cell | 14 studies | 59% ± 19% | |
mast cell | 13 studies | 68% ± 27% | |
GABAergic neuron | 11 studies | 47% ± 23% | |
adipocyte | 8 studies | 34% ± 7% | |
fibroblast | 7 studies | 34% ± 13% | |
smooth muscle cell | 7 studies | 23% ± 6% | |
interneuron | 6 studies | 54% ± 25% | |
glutamatergic neuron | 5 studies | 38% ± 15% | |
retinal ganglion cell | 5 studies | 24% ± 5% | |
type I pneumocyte | 5 studies | 29% ± 7% | |
type II pneumocyte | 5 studies | 21% ± 5% | |
mesothelial cell | 4 studies | 30% ± 9% | |
amacrine cell | 4 studies | 36% ± 11% | |
club cell | 4 studies | 25% ± 7% | |
GABAergic interneuron | 3 studies | 46% ± 11% | |
granule cell | 3 studies | 40% ± 33% | |
microglial cell | 3 studies | 40% ± 23% | |
GABAergic amacrine cell | 3 studies | 26% ± 8% | |
OFF-bipolar cell | 3 studies | 37% ± 13% | |
glycinergic amacrine cell | 3 studies | 59% ± 10% | |
mucus secreting cell | 3 studies | 22% ± 2% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 11 studies | 30% ± 9% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 96% | 1985.73 | 2528 / 2642 | 98% | 48.83 | 691 / 705 |
prostate | 98% | 1502.68 | 240 / 245 | 90% | 12.56 | 450 / 502 |
breast | 94% | 905.16 | 431 / 459 | 88% | 25.78 | 986 / 1118 |
esophagus | 99% | 1360.52 | 1429 / 1445 | 69% | 11.87 | 126 / 183 |
lung | 98% | 986.76 | 567 / 578 | 67% | 8.48 | 769 / 1155 |
intestine | 98% | 2116.73 | 944 / 966 | 66% | 7.84 | 347 / 527 |
uterus | 100% | 5914.63 | 170 / 170 | 63% | 16.87 | 287 / 459 |
ovary | 100% | 2242.46 | 180 / 180 | 60% | 6.55 | 257 / 430 |
bladder | 100% | 1795.19 | 21 / 21 | 54% | 6.92 | 270 / 504 |
stomach | 69% | 392.02 | 247 / 359 | 69% | 9.67 | 196 / 286 |
thymus | 92% | 633.48 | 604 / 653 | 33% | 3.64 | 197 / 605 |
blood vessel | 100% | 3489.54 | 1333 / 1335 | 0% | 0 | 0 / 0 |
muscle | 100% | 1979.57 | 800 / 803 | 0% | 0 | 0 / 0 |
adipose | 97% | 1317.06 | 1168 / 1204 | 0% | 0 | 0 / 0 |
pancreas | 2% | 7.54 | 7 / 328 | 89% | 15.62 | 159 / 178 |
skin | 72% | 796.25 | 1307 / 1809 | 11% | 2.79 | 53 / 472 |
adrenal gland | 48% | 298.98 | 124 / 258 | 25% | 5.43 | 57 / 230 |
tonsil | 0% | 0 | 0 / 0 | 56% | 6.29 | 25 / 45 |
kidney | 31% | 166.96 | 28 / 89 | 21% | 2.02 | 185 / 901 |
spleen | 48% | 270.87 | 116 / 241 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 48% | 4.51 | 38 / 80 |
liver | 1% | 3.23 | 2 / 226 | 10% | 1.57 | 39 / 406 |
lymph node | 0% | 0 | 0 / 0 | 7% | 0.39 | 2 / 29 |
heart | 5% | 23.80 | 46 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 2% | 9.48 | 23 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0006811 | Biological process | monoatomic ion transport |
GO_0010628 | Biological process | positive regulation of gene expression |
GO_0035725 | Biological process | sodium ion transmembrane transport |
GO_0006874 | Biological process | intracellular calcium ion homeostasis |
GO_0150104 | Biological process | transport across blood-brain barrier |
GO_0010629 | Biological process | negative regulation of gene expression |
GO_0071805 | Biological process | potassium ion transmembrane transport |
GO_0070588 | Biological process | calcium ion transmembrane transport |
GO_0030282 | Biological process | bone mineralization |
GO_0071944 | Cellular component | cell periphery |
GO_0005886 | Cellular component | plasma membrane |
GO_0015293 | Molecular function | symporter activity |
GO_0005262 | Molecular function | calcium channel activity |
GO_0008273 | Molecular function | calcium, potassium:sodium antiporter activity |
Gene name | SLC24A3 |
Protein name | Sodium/potassium/calcium exchanger 3 (Na(+)/K(+)/Ca(2+)-exchange protein 3) (Solute carrier family 24 member 3) |
Synonyms | NCKX3 |
Description | FUNCTION: Calcium, potassium:sodium antiporter that transports 1 Ca(2+) and 1 K(+) in exchange for 4 Na(+). . |
Accessions | ENST00000328041.11 Q9HC58 |