Name | Number of supported studies  | Average coverage | |
|---|---|---|---|
| astrocyte | 9 studies | 34% ± 15% | |
| plasma cell | 4 studies | 28% ± 9% | |
| glutamatergic neuron | 4 studies | 40% ± 16% | |
| plasmablast | 3 studies | 39% ± 17% | |
| GABAergic neuron | 3 studies | 39% ± 10% |
Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| brain | 4 studies | 29% ± 10% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| brain | 99% | 5652.49 | 2603 / 2642 | 100% | 97.72 | 702 / 705 |
| prostate | 98% | 1612.60 | 240 / 245 | 99% | 30.24 | 496 / 502 |
| stomach | 98% | 1358.55 | 353 / 359 | 95% | 28.16 | 271 / 286 |
| skin | 96% | 1741.98 | 1730 / 1809 | 97% | 79.14 | 456 / 472 |
| adrenal gland | 100% | 5992.15 | 258 / 258 | 91% | 53.46 | 209 / 230 |
| intestine | 95% | 1175.30 | 914 / 966 | 95% | 28.42 | 500 / 527 |
| esophagus | 94% | 1283.51 | 1363 / 1445 | 93% | 48.50 | 171 / 183 |
| pancreas | 100% | 3793.31 | 328 / 328 | 83% | 13.27 | 148 / 178 |
| uterus | 100% | 2340.67 | 170 / 170 | 82% | 24.66 | 378 / 459 |
| breast | 84% | 2253.30 | 387 / 459 | 97% | 61.46 | 1088 / 1118 |
| lung | 79% | 1025.57 | 457 / 578 | 92% | 38.16 | 1067 / 1155 |
| ovary | 99% | 2597.03 | 179 / 180 | 60% | 10.11 | 259 / 430 |
| bladder | 76% | 962.48 | 16 / 21 | 71% | 20.61 | 356 / 504 |
| liver | 70% | 1052.72 | 159 / 226 | 62% | 12.37 | 251 / 406 |
| thymus | 50% | 440.99 | 326 / 653 | 61% | 10.77 | 369 / 605 |
| spleen | 100% | 1899.63 | 240 / 241 | 0% | 0 | 0 / 0 |
| blood vessel | 99% | 2836.09 | 1327 / 1335 | 0% | 0 | 0 / 0 |
| muscle | 99% | 3354.18 | 793 / 803 | 0% | 0 | 0 / 0 |
| tonsil | 0% | 0 | 0 / 0 | 98% | 47.79 | 44 / 45 |
| lymph node | 0% | 0 | 0 / 0 | 97% | 58.75 | 28 / 29 |
| eye | 0% | 0 | 0 / 0 | 83% | 39.51 | 66 / 80 |
| kidney | 13% | 136.35 | 12 / 89 | 61% | 11.84 | 549 / 901 |
| adipose | 71% | 701.62 | 855 / 1204 | 0% | 0 | 0 / 0 |
| heart | 56% | 615.07 | 481 / 861 | 0% | 0 | 0 / 0 |
| peripheral blood | 43% | 1792.41 | 402 / 929 | 0% | 0 | 0 / 0 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
| GO_0034589 | Biological process | hydroxyproline transport |
| GO_1903812 | Biological process | L-serine import across plasma membrane |
| GO_0006868 | Biological process | glutamine transport |
| GO_0150104 | Biological process | transport across blood-brain barrier |
| GO_0015813 | Biological process | L-glutamate transmembrane transport |
| GO_1902476 | Biological process | chloride transmembrane transport |
| GO_0015808 | Biological process | L-alanine transport |
| GO_0015826 | Biological process | threonine transport |
| GO_0015824 | Biological process | proline transport |
| GO_0015811 | Biological process | L-cystine transport |
| GO_0015825 | Biological process | L-serine transport |
| GO_0050890 | Biological process | cognition |
| GO_0006865 | Biological process | amino acid transport |
| GO_0035524 | Biological process | proline transmembrane transport |
| GO_0140009 | Biological process | L-aspartate import across plasma membrane |
| GO_1904273 | Biological process | L-alanine import across plasma membrane |
| GO_0035249 | Biological process | synaptic transmission, glutamatergic |
| GO_0005886 | Cellular component | plasma membrane |
| GO_0016020 | Cellular component | membrane |
| GO_0005813 | Cellular component | centrosome |
| GO_0070062 | Cellular component | extracellular exosome |
| GO_0005882 | Cellular component | intermediate filament |
| GO_0009986 | Cellular component | cell surface |
| GO_0045202 | Cellular component | synapse |
| GO_0042470 | Cellular component | melanosome |
| GO_0015171 | Molecular function | amino acid transmembrane transporter activity |
| GO_0015193 | Molecular function | L-proline transmembrane transporter activity |
| GO_0015194 | Molecular function | L-serine transmembrane transporter activity |
| GO_0015183 | Molecular function | L-aspartate transmembrane transporter activity |
| GO_0015195 | Molecular function | L-threonine transmembrane transporter activity |
| GO_0015180 | Molecular function | L-alanine transmembrane transporter activity |
| GO_0015293 | Molecular function | symporter activity |
| GO_0015186 | Molecular function | L-glutamine transmembrane transporter activity |
| GO_0015184 | Molecular function | L-cystine transmembrane transporter activity |
| GO_0034590 | Molecular function | L-hydroxyproline transmembrane transporter activity |
| GO_0005254 | Molecular function | chloride channel activity |
| Gene name | SLC1A4 |
| Protein name | Neutral amino acid transporter A (Alanine/serine/cysteine/threonine transporter 1) (ASCT-1) (Solute carrier family 1 member 4) |
| Synonyms | ASCT1 SATT |
| Description | FUNCTION: Sodium-dependent neutral amino-acid transporter that mediates transport of alanine, serine, cysteine, proline, hydroxyproline and threonine. . |
| Accessions | ENST00000531327.5 [P43007-2] P43007 ENST00000234256.4 [P43007-1] |
