SH2D3A report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
type I pneumocyte	5 studies	21% ± 1%	Explore
basal cell	5 studies	26% ± 7%	Explore
epithelial cell	4 studies	35% ± 4%	Explore
goblet cell	3 studies	20% ± 3%	Explore

II. Expression across tissues

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
lung	99%	1339.69	571 / 578	99%	17.18	1138 / 1155
thymus	100%	1583.04	653 / 653	97%	13.92	584 / 605
pancreas	100%	1189.59	328 / 328	96%	26.48	171 / 178
prostate	93%	2167.09	229 / 245	96%	11.38	484 / 502
kidney	100%	1516.26	89 / 89	78%	6.30	700 / 901
stomach	76%	878.67	274 / 359	99%	17.46	282 / 286
bladder	67%	1035.00	14 / 21	96%	23.25	486 / 504
breast	63%	980.58	288 / 459	97%	10.75	1083 / 1118
intestine	54%	948.57	518 / 966	99%	21.71	521 / 527
esophagus	43%	1140.13	623 / 1445	99%	18.10	182 / 183
uterus	24%	135.22	40 / 170	86%	20.18	397 / 459
ovary	12%	35.05	22 / 180	97%	12.70	417 / 430
spleen	100%	663.55	241 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	100%	15.87	45 / 45
ureter	0%	0	0 / 0	100%	30.01	1 / 1
lymph node	0%	0	0 / 0	93%	6.92	27 / 29
skin	72%	1959.46	1306 / 1809	9%	0.57	44 / 472
peripheral blood	74%	589.22	687 / 929	0%	0	0 / 0
liver	17%	64.43	38 / 226	23%	5.23	93 / 406
adipose	10%	34.16	116 / 1204	0%	0	0 / 0
blood vessel	6%	23.44	86 / 1335	0%	0	0 / 0
adrenal gland	1%	3.09	2 / 258	4%	0.29	10 / 230
muscle	3%	10.50	27 / 803	0%	0	0 / 0
heart	1%	3.27	7 / 861	0%	0	0 / 0
brain	0%	0	0 / 2642	0%	0.02	2 / 705
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
eye	0%	0	0 / 0	0%	0	0 / 80
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0