Name | Number of supported studies | Average coverage | |
---|---|---|---|
glutamatergic neuron | 10 studies | 43% ± 25% | |
oligodendrocyte precursor cell | 10 studies | 29% ± 14% | |
astrocyte | 9 studies | 31% ± 14% | |
microglial cell | 8 studies | 25% ± 8% | |
endothelial cell | 7 studies | 29% ± 11% | |
GABAergic neuron | 7 studies | 48% ± 24% | |
neuron | 6 studies | 32% ± 14% | |
interneuron | 6 studies | 44% ± 29% | |
retinal ganglion cell | 5 studies | 53% ± 24% | |
oligodendrocyte | 5 studies | 25% ± 9% | |
granule cell | 4 studies | 33% ± 10% | |
epithelial cell | 4 studies | 23% ± 8% | |
macrophage | 4 studies | 25% ± 5% | |
GABAergic interneuron | 3 studies | 34% ± 3% | |
OFF-bipolar cell | 3 studies | 43% ± 23% | |
dendritic cell | 3 studies | 18% ± 1% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 12 studies | 35% ± 21% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
adrenal gland | 100% | 1012.85 | 258 / 258 | 100% | 24.95 | 230 / 230 |
kidney | 100% | 1075.92 | 89 / 89 | 100% | 14.31 | 901 / 901 |
thymus | 100% | 1859.96 | 653 / 653 | 100% | 55.69 | 605 / 605 |
brain | 100% | 2674.47 | 2641 / 2642 | 100% | 21.08 | 704 / 705 |
prostate | 100% | 1482.35 | 244 / 245 | 100% | 29.58 | 502 / 502 |
breast | 100% | 1087.96 | 459 / 459 | 99% | 14.54 | 1112 / 1118 |
uterus | 100% | 1285.34 | 170 / 170 | 99% | 11.36 | 455 / 459 |
pancreas | 99% | 766.05 | 325 / 328 | 100% | 13.09 | 178 / 178 |
bladder | 100% | 1378.81 | 21 / 21 | 99% | 10.28 | 499 / 504 |
skin | 100% | 985.65 | 1807 / 1809 | 99% | 11.85 | 467 / 472 |
intestine | 100% | 1188.62 | 966 / 966 | 98% | 10.38 | 518 / 527 |
lung | 99% | 910.32 | 573 / 578 | 99% | 9.53 | 1145 / 1155 |
stomach | 100% | 965.71 | 359 / 359 | 98% | 8.06 | 279 / 286 |
esophagus | 100% | 1164.37 | 1443 / 1445 | 97% | 6.41 | 178 / 183 |
ovary | 100% | 1609.43 | 180 / 180 | 96% | 6.40 | 411 / 430 |
liver | 93% | 466.77 | 211 / 226 | 98% | 10.05 | 397 / 406 |
blood vessel | 100% | 2033.36 | 1335 / 1335 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 12.77 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 17.37 | 29 / 29 |
spleen | 100% | 870.15 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 9.66 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 10.31 | 1 / 1 |
adipose | 100% | 983.64 | 1200 / 1204 | 0% | 0 | 0 / 0 |
muscle | 99% | 777.41 | 792 / 803 | 0% | 0 | 0 / 0 |
heart | 94% | 686.74 | 808 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 75% | 504.56 | 699 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0007165 | Biological process | signal transduction |
GO_0050709 | Biological process | negative regulation of protein secretion |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005829 | Cellular component | cytosol |
GO_0005737 | Cellular component | cytoplasm |
GO_0005634 | Cellular component | nucleus |
GO_0005085 | Molecular function | guanyl-nucleotide exchange factor activity |
GO_0005515 | Molecular function | protein binding |
Gene name | SERGEF |
Protein name | Secretion regulating guanine nucleotide exchange factor (cDNA FLJ59192, highly similar to Secretion-regulating guanine nucleotide exchange factor) Secretion regulating guanine nucleotide exchange factor Secretion-regulating guanine nucleotide exchange factor (Deafness locus-associated putative guanine nucleotide exchange factor) (DelGEF) (Guanine nucleotide exchange factor-related protein) |
Synonyms | hCG_15536 DELGEF GNEFR |
Description | FUNCTION: Probable guanine nucleotide exchange factor (GEF), which may be involved in the secretion process. |
Accessions | ENST00000530925.5 ENST00000528200.5 [Q9UGK8-2] H0YDC8 H0YEV5 ENST00000265965.10 [Q9UGK8-1] H0YEL8 E9PIV0 E9PIU4 H0YE53 ENST00000529151.5 ENST00000525920.5 E9PMV6 ENST00000532389.5 ENST00000533328.5 ENST00000524716.5 ENST00000532546.5 E9PS70 B4DFC0 ENST00000525422.5 ENST00000533241.1 G3V1B4 ENST00000530613.5 E9PL52 Q9UGK8 ENST00000529728.5 H0YD20 ENST00000527494.5 E9PR50 ENST00000532265.5 |