SEMA4F | OmnibusX

Name	Number of supported studies	Average coverage
glutamatergic neuron	4 studies	38% ± 19%	Explore
GABAergic neuron	3 studies	28% ± 6%	Explore

sc-RNAseq data

Insufficient scRNA-seq data for expression of SEMA4F at tissue level.

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
brain	100%	1273.71	2631 / 2642	98%	8.64	693 / 705
breast	100%	691.00	458 / 459	98%	8.60	1095 / 1118
thymus	100%	703.98	653 / 653	97%	6.86	589 / 605
ovary	100%	1046.38	180 / 180	97%	6.13	415 / 430
pancreas	98%	340.24	320 / 328	99%	6.29	176 / 178
kidney	100%	632.03	89 / 89	96%	6.67	867 / 901
uterus	100%	956.42	170 / 170	96%	8.65	440 / 459
bladder	100%	520.67	21 / 21	95%	7.22	480 / 504
skin	98%	490.50	1773 / 1809	97%	13.17	458 / 472
prostate	100%	712.14	245 / 245	94%	4.96	474 / 502
lung	98%	540.01	566 / 578	96%	10.10	1105 / 1155
intestine	99%	473.76	956 / 966	90%	4.91	473 / 527
esophagus	94%	386.29	1354 / 1445	93%	6.12	171 / 183
adrenal gland	97%	465.76	250 / 258	89%	10.38	205 / 230
stomach	99%	379.39	354 / 359	84%	4.26	241 / 286
spleen	100%	548.46	241 / 241	0%	0	0 / 0
ureter	0%	0	0 / 0	100%	3.93	1 / 1
adipose	100%	584.36	1203 / 1204	0%	0	0 / 0
blood vessel	99%	602.10	1324 / 1335	0%	0	0 / 0
tonsil	0%	0	0 / 0	98%	5.94	44 / 45
heart	92%	329.19	793 / 861	0%	0	0 / 0
liver	33%	67.77	75 / 226	58%	2.68	234 / 406
lymph node	0%	0	0 / 0	86%	3.60	25 / 29
eye	0%	0	0 / 0	83%	3.88	66 / 80
peripheral blood	55%	169.33	515 / 929	0%	0	0 / 0
muscle	55%	111.95	438 / 803	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0

GO_0030517	Biological process	negative regulation of axon extension
GO_0071526	Biological process	semaphorin-plexin signaling pathway
GO_0007399	Biological process	nervous system development
GO_0030335	Biological process	positive regulation of cell migration
GO_0031290	Biological process	retinal ganglion cell axon guidance
GO_0001755	Biological process	neural crest cell migration
GO_0007267	Biological process	cell-cell signaling
GO_0007411	Biological process	axon guidance
GO_0050919	Biological process	negative chemotaxis
GO_0043204	Cellular component	perikaryon
GO_0098978	Cellular component	glutamatergic synapse
GO_0098839	Cellular component	postsynaptic density membrane
GO_0005783	Cellular component	endoplasmic reticulum
GO_0005886	Cellular component	plasma membrane
GO_0016020	Cellular component	membrane
GO_0030425	Cellular component	dendrite
GO_0045499	Molecular function	chemorepellent activity
GO_0030215	Molecular function	semaphorin receptor binding

Gene name	SEMA4F
Protein name	Ssemaphorin 4F (cDNA FLJ52836, highly similar to Semaphorin-4F) Ssemaphorin 4F Semaphorin-4F (Semaphorin-M) (Sema M) (Semaphorin-W) (Sema W)
Synonyms	SEMAW SEMAM
Description	FUNCTION: Probable cell surface receptor that regulates oligodendroglial precursor cell migration (By similarity). Might also regulate differentiation of oligodendroglial precursor cells (By similarity). Has growth cone collapse activity against retinal ganglion-cell axons (By similarity). .
Accessions	ENST00000453930.5 C9JKW7 F8WEH3 ENST00000458114.5 ENST00000416236.5 ENST00000434486.5 B7Z931 ENST00000339773.9 [O95754-2] F8WD61 ENST00000611975.4 C9K0A1 A0A087WYZ7 ENST00000420077.5 O95754 F8WCP8 ENST00000446927.5 ENST00000357877.7 [O95754-1]

SEMA4F report