Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| ciliated cell | 17 studies | 35% ± 12% | |
| fibroblast | 13 studies | 30% ± 14% | |
| pericyte | 13 studies | 21% ± 5% | |
| type II pneumocyte | 12 studies | 57% ± 22% | |
| type I pneumocyte | 11 studies | 47% ± 19% | |
| club cell | 10 studies | 41% ± 18% | |
| epithelial cell | 10 studies | 41% ± 15% | |
| erythrocyte | 9 studies | 55% ± 17% | |
| smooth muscle cell | 8 studies | 24% ± 8% | |
| mesothelial cell | 8 studies | 35% ± 13% | |
| basal cell | 6 studies | 35% ± 16% | |
| ionocyte | 6 studies | 33% ± 9% | |
| respiratory goblet cell | 6 studies | 49% ± 19% | |
| goblet cell | 6 studies | 23% ± 7% | |
| hepatocyte | 6 studies | 44% ± 14% | |
| erythroblast | 5 studies | 41% ± 24% | |
| intestinal crypt stem cell | 5 studies | 35% ± 16% | |
| transit amplifying cell | 5 studies | 31% ± 13% | |
| secretory cell | 4 studies | 51% ± 18% | |
| myofibroblast cell | 4 studies | 23% ± 6% | |
| enterocyte | 4 studies | 34% ± 9% | |
| progenitor cell | 4 studies | 49% ± 28% | |
| endothelial cell | 4 studies | 26% ± 10% | |
| astrocyte | 4 studies | 25% ± 11% | |
| duct epithelial cell | 3 studies | 37% ± 21% | |
| kidney loop of Henle epithelial cell | 3 studies | 17% ± 2% | |
| adipocyte | 3 studies | 24% ± 6% | |
| connective tissue cell | 3 studies | 21% ± 4% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| prostate | 100% | 6977.53 | 244 / 245 | 99% | 95.14 | 495 / 502 |
| ovary | 99% | 6424.48 | 179 / 180 | 97% | 121.67 | 416 / 430 |
| breast | 100% | 7793.35 | 457 / 459 | 96% | 176.97 | 1071 / 1118 |
| liver | 100% | 17323.46 | 226 / 226 | 93% | 183.80 | 379 / 406 |
| intestine | 100% | 34372.10 | 962 / 966 | 90% | 236.55 | 475 / 527 |
| thymus | 100% | 19968.12 | 653 / 653 | 87% | 163.40 | 527 / 605 |
| stomach | 100% | 11966.72 | 358 / 359 | 85% | 164.74 | 244 / 286 |
| lung | 99% | 11231.87 | 575 / 578 | 68% | 103.64 | 781 / 1155 |
| pancreas | 80% | 1963.02 | 261 / 328 | 82% | 63.11 | 146 / 178 |
| uterus | 98% | 4977.42 | 166 / 170 | 63% | 65.92 | 289 / 459 |
| kidney | 99% | 6695.10 | 88 / 89 | 61% | 28.19 | 551 / 901 |
| bladder | 90% | 6714.90 | 19 / 21 | 57% | 96.13 | 285 / 504 |
| skin | 78% | 2528.00 | 1407 / 1809 | 64% | 59.88 | 304 / 472 |
| esophagus | 91% | 5696.19 | 1308 / 1445 | 40% | 35.25 | 74 / 183 |
| spleen | 100% | 7319.24 | 241 / 241 | 0% | 0 | 0 / 0 |
| adipose | 100% | 8790.87 | 1199 / 1204 | 0% | 0 | 0 / 0 |
| blood vessel | 99% | 5488.02 | 1318 / 1335 | 0% | 0 | 0 / 0 |
| brain | 69% | 2444.76 | 1834 / 2642 | 29% | 13.76 | 201 / 705 |
| muscle | 96% | 3982.61 | 772 / 803 | 0% | 0 | 0 / 0 |
| eye | 0% | 0 | 0 / 0 | 91% | 64.18 | 73 / 80 |
| heart | 90% | 3420.42 | 772 / 861 | 0% | 0 | 0 / 0 |
| adrenal gland | 68% | 1666.26 | 176 / 258 | 4% | 2.24 | 9 / 230 |
| peripheral blood | 66% | 5222.13 | 613 / 929 | 0% | 0 | 0 / 0 |
| tonsil | 0% | 0 | 0 / 0 | 22% | 13.74 | 10 / 45 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
| GO_0015031 | Biological process | protein transport |
| GO_0005730 | Cellular component | nucleolus |
| GO_0005615 | Cellular component | extracellular space |
| GO_0070062 | Cellular component | extracellular exosome |
| GO_0005829 | Cellular component | cytosol |
| GO_0016020 | Cellular component | membrane |
| GO_0001650 | Cellular component | fibrillar center |
| GO_0008430 | Molecular function | selenium binding |
| GO_0018549 | Molecular function | methanethiol oxidase activity |
| GO_0005515 | Molecular function | protein binding |
| Gene name | SELENBP1 |
| Protein name | Methanethiol oxidase (MTO) (EC 1.8.3.4) (56 kDa selenium-binding protein) (SBP56) (SP56) (Selenium-binding protein 1) Methanethiol oxidase (MTO) (EC 1.8.3.4) (Selenium-binding protein 1) Selenium binding protein 1 |
| Synonyms | hCG_18906 SBP |
| Description | FUNCTION: Catalyzes the oxidation of methanethiol, an organosulfur compound known to be produced in substantial amounts by gut bacteria . Selenium-binding protein which may be involved in the sensing of reactive xenobiotics in the cytoplasm. May be involved in intra-Golgi protein transport (By similarity). . FUNCTION: Catalyzes the oxidation of methanethiol, an organosulfur compound known to be produced in substantial amounts by gut bacteria. Selenium-binding protein which may be involved in the sensing of reactive xenobiotics in the cytoplasm. May be involved in intra-Golgi protein transport. . FUNCTION: Catalyzes the oxidation of methanethiol, an organosulfur compound known to be produced in substantial amounts by gut bacteria. Selenium-binding protein which may be involved in the sensing of reactive xenobiotics in the cytoplasm. May be involved in intra-Golgi protein transport. . FUNCTION: Catalyzes the oxidation of methanethiol, an organosulfur compound known to be produced in substantial amounts by gut bacteria. Selenium-binding protein which may be involved in the sensing of reactive xenobiotics in the cytoplasm. May be involved in intra-Golgi protein transport. . FUNCTION: Catalyzes the oxidation of methanethiol, an organosulfur compound known to be produced in substantial amounts by gut bacteria. Selenium-binding protein which may be involved in the sensing of reactive xenobiotics in the cytoplasm. May be involved in intra-Golgi protein transport. . FUNCTION: Catalyzes the oxidation of methanethiol, an organosulfur compound known to be produced in substantial amounts by gut bacteria. Selenium-binding protein which may be involved in the sensing of reactive xenobiotics in the cytoplasm. May be involved in intra-Golgi protein transport. . FUNCTION: Catalyzes the oxidation of methanethiol, an organosulfur compound known to be produced in substantial amounts by gut bacteria. Selenium-binding protein which may be involved in the sensing of reactive xenobiotics in the cytoplasm. May be involved in intra-Golgi protein transport. . |
| Accessions | ENST00000455397.5 F2Z2W8 A6PVX1 ENST00000455839.5 ENST00000443708.5 ENST00000427977.6 Q9H8A8 H0Y532 F8WBA9 ENST00000447402.7 [Q13228-3] ENST00000458566.5 Q13228 ENST00000368868.10 [Q13228-1] ENST00000424475.5 F8WCR4 ENST00000423070.5 ENST00000426705.6 [Q13228-4] C9JVL0 ENST00000427867.2 |