Insufficient scRNA-seq data for expression of SCARF2 at single-cell level.
Insufficient scRNA-seq data for expression of SCARF2 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
ovary | 100% | 3334.27 | 180 / 180 | 98% | 28.32 | 422 / 430 |
prostate | 100% | 2835.80 | 244 / 245 | 98% | 10.16 | 490 / 502 |
skin | 97% | 2089.03 | 1757 / 1809 | 97% | 30.60 | 458 / 472 |
lung | 100% | 4001.12 | 577 / 578 | 88% | 10.94 | 1020 / 1155 |
breast | 100% | 1916.03 | 457 / 459 | 87% | 11.63 | 978 / 1118 |
thymus | 100% | 2197.60 | 652 / 653 | 80% | 7.05 | 486 / 605 |
esophagus | 80% | 1496.65 | 1159 / 1445 | 96% | 19.35 | 176 / 183 |
bladder | 100% | 2322.10 | 21 / 21 | 73% | 9.07 | 367 / 504 |
intestine | 93% | 1372.18 | 901 / 966 | 77% | 10.79 | 407 / 527 |
uterus | 99% | 3132.92 | 169 / 170 | 68% | 15.47 | 312 / 459 |
kidney | 98% | 1673.82 | 87 / 89 | 69% | 6.16 | 626 / 901 |
stomach | 62% | 1068.35 | 224 / 359 | 85% | 17.23 | 243 / 286 |
adrenal gland | 90% | 866.43 | 232 / 258 | 43% | 3.24 | 98 / 230 |
brain | 26% | 162.30 | 681 / 2642 | 98% | 12.29 | 691 / 705 |
pancreas | 29% | 219.09 | 94 / 328 | 93% | 22.24 | 166 / 178 |
blood vessel | 100% | 6089.97 | 1335 / 1335 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 72.98 | 80 / 80 |
ureter | 0% | 0 | 0 / 0 | 100% | 4.51 | 1 / 1 |
adipose | 100% | 2508.20 | 1199 / 1204 | 0% | 0 | 0 / 0 |
spleen | 98% | 1641.73 | 237 / 241 | 0% | 0 | 0 / 0 |
heart | 82% | 926.62 | 703 / 861 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 52% | 2.77 | 15 / 29 |
liver | 16% | 130.72 | 36 / 226 | 32% | 2.22 | 129 / 406 |
tonsil | 0% | 0 | 0 / 0 | 40% | 3.32 | 18 / 45 |
muscle | 17% | 132.86 | 139 / 803 | 0% | 0 | 0 / 0 |
peripheral blood | 0% | 0.99 | 2 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0016192 | Biological process | vesicle-mediated transport |
GO_0007157 | Biological process | heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules |
GO_0016020 | Cellular component | membrane |
GO_0005925 | Cellular component | focal adhesion |
GO_0005515 | Molecular function | protein binding |
GO_0005044 | Molecular function | scavenger receptor activity |
Gene name | SCARF2 |
Protein name | Scavenger receptor class F member 2 (SRECRP-1) (Scavenger receptor expressed by endothelial cells 2 protein) (SREC-II) |
Synonyms | SREPCR SREC2 |
Description | FUNCTION: Probable adhesion protein, which mediates homophilic and heterophilic interactions. In contrast to SCARF1, it poorly mediates the binding and degradation of acetylated low density lipoprotein (Ac-LDL) (By similarity). . |
Accessions | Q96GP6 ENST00000623402.1 [Q96GP6-1] ENST00000622235.5 [Q96GP6-2] |