Insufficient scRNA-seq data for expression of SALL4 at single-cell level.
Insufficient scRNA-seq data for expression of SALL4 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
pancreas | 100% | 308.06 | 328 / 328 | 90% | 4.67 | 160 / 178 |
thymus | 100% | 1611.22 | 652 / 653 | 62% | 2.18 | 373 / 605 |
prostate | 99% | 661.22 | 242 / 245 | 50% | 1.27 | 249 / 502 |
breast | 74% | 44.60 | 339 / 459 | 71% | 2.30 | 795 / 1118 |
bladder | 57% | 42.24 | 12 / 21 | 84% | 5.50 | 423 / 504 |
intestine | 58% | 41.80 | 562 / 966 | 74% | 3.73 | 390 / 527 |
liver | 97% | 195.56 | 220 / 226 | 33% | 2.19 | 136 / 406 |
skin | 73% | 47.65 | 1312 / 1809 | 56% | 3.29 | 263 / 472 |
ovary | 52% | 23.40 | 93 / 180 | 73% | 4.14 | 314 / 430 |
lung | 54% | 32.60 | 312 / 578 | 71% | 3.54 | 815 / 1155 |
esophagus | 37% | 20.94 | 536 / 1445 | 82% | 5.74 | 150 / 183 |
adrenal gland | 71% | 63.17 | 182 / 258 | 48% | 4.02 | 111 / 230 |
stomach | 38% | 17.74 | 137 / 359 | 75% | 5.94 | 215 / 286 |
uterus | 38% | 28.79 | 65 / 170 | 69% | 5.56 | 319 / 459 |
kidney | 88% | 89.43 | 78 / 89 | 15% | 0.54 | 139 / 901 |
eye | 0% | 0 | 0 / 0 | 100% | 12.74 | 80 / 80 |
ureter | 0% | 0 | 0 / 0 | 100% | 9.95 | 1 / 1 |
spleen | 88% | 139.07 | 212 / 241 | 0% | 0 | 0 / 0 |
brain | 53% | 41.59 | 1411 / 2642 | 21% | 0.71 | 145 / 705 |
adipose | 63% | 40.04 | 762 / 1204 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 49% | 1.30 | 22 / 45 |
heart | 23% | 10.05 | 201 / 861 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 14% | 0.29 | 4 / 29 |
blood vessel | 11% | 5.81 | 144 / 1335 | 0% | 0 | 0 / 0 |
peripheral blood | 7% | 3.02 | 66 / 929 | 0% | 0 | 0 / 0 |
muscle | 1% | 0.45 | 10 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0001833 | Biological process | inner cell mass cell proliferation |
GO_0003281 | Biological process | ventricular septum development |
GO_0035019 | Biological process | somatic stem cell population maintenance |
GO_0000122 | Biological process | negative regulation of transcription by RNA polymerase II |
GO_0030326 | Biological process | embryonic limb morphogenesis |
GO_0001843 | Biological process | neural tube closure |
GO_0045944 | Biological process | positive regulation of transcription by RNA polymerase II |
GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
GO_0000792 | Cellular component | heterochromatin |
GO_0043231 | Cellular component | intracellular membrane-bounded organelle |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005737 | Cellular component | cytoplasm |
GO_0005634 | Cellular component | nucleus |
GO_0000978 | Molecular function | RNA polymerase II cis-regulatory region sequence-specific DNA binding |
GO_0005515 | Molecular function | protein binding |
GO_0000981 | Molecular function | DNA-binding transcription factor activity, RNA polymerase II-specific |
GO_0046872 | Molecular function | metal ion binding |
Gene name | SALL4 |
Protein name | SALL4C (Spalt like transcription factor 4) Sal-like protein 4 (Zinc finger protein 797) (Zinc finger protein SALL4) |
Synonyms | ZNF797 |
Description | FUNCTION: Transcription factor with a key role in the maintenance and self-renewal of embryonic and hematopoietic stem cells. . |
Accessions | ENST00000371539.7 Q9UJQ4 ENST00000217086.9 [Q9UJQ4-1] ENST00000395997.3 [Q9UJQ4-2] Q6Y8G5 |