Name | Number of supported studies | Average coverage | |
---|---|---|---|
Mueller cell | 4 studies | 43% ± 7% | |
retinal pigment epithelial cell | 3 studies | 30% ± 8% |
Insufficient scRNA-seq data for expression of RRH at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 97% | 29.47 | 2570 / 2642 | 1% | 0.02 | 10 / 705 |
breast | 93% | 16.63 | 428 / 459 | 2% | 0.05 | 27 / 1118 |
thymus | 96% | 13.76 | 624 / 653 | 0% | 0 | 0 / 605 |
adrenal gland | 94% | 12.65 | 243 / 258 | 0% | 0 | 0 / 230 |
prostate | 93% | 11.07 | 227 / 245 | 0% | 0 | 0 / 502 |
kidney | 92% | 11.91 | 82 / 89 | 0% | 0.01 | 3 / 901 |
uterus | 91% | 10.35 | 154 / 170 | 0% | 0.00 | 1 / 459 |
ovary | 89% | 9.70 | 161 / 180 | 0% | 0 | 0 / 430 |
intestine | 88% | 8.64 | 853 / 966 | 0% | 0.01 | 2 / 527 |
adipose | 88% | 8.99 | 1065 / 1204 | 0% | 0 | 0 / 0 |
lung | 87% | 10.05 | 501 / 578 | 1% | 0.02 | 14 / 1155 |
bladder | 86% | 9.95 | 18 / 21 | 2% | 0.05 | 8 / 504 |
spleen | 87% | 8.55 | 210 / 241 | 0% | 0 | 0 / 0 |
skin | 87% | 13.78 | 1568 / 1809 | 0% | 0 | 0 / 472 |
blood vessel | 86% | 9.18 | 1152 / 1335 | 0% | 0 | 0 / 0 |
stomach | 84% | 7.59 | 303 / 359 | 1% | 0.02 | 2 / 286 |
esophagus | 84% | 7.62 | 1208 / 1445 | 1% | 0.02 | 2 / 183 |
pancreas | 80% | 7.23 | 261 / 328 | 0% | 0 | 0 / 178 |
liver | 78% | 6.46 | 177 / 226 | 0% | 0 | 0 / 406 |
muscle | 73% | 5.78 | 584 / 803 | 0% | 0 | 0 / 0 |
heart | 60% | 4.04 | 518 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 25% | 1.63 | 234 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 9% | 0.46 | 7 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 45 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0007601 | Biological process | visual perception |
GO_0007186 | Biological process | G protein-coupled receptor signaling pathway |
GO_0009584 | Biological process | detection of visible light |
GO_0007602 | Biological process | phototransduction |
GO_0071482 | Biological process | cellular response to light stimulus |
GO_0005886 | Cellular component | plasma membrane |
GO_0001750 | Cellular component | photoreceptor outer segment |
GO_0008020 | Molecular function | G protein-coupled photoreceptor activity |
GO_0004930 | Molecular function | G protein-coupled receptor activity |
GO_0005515 | Molecular function | protein binding |
Gene name | RRH |
Protein name | Retinal pigment epithelium-derived rhodopsin homolog Visual pigment-like receptor peropsin |
Synonyms | |
Description | FUNCTION: May play a role in rpe physiology either by detecting light directly or by monitoring the concentration of retinoids or other photoreceptor-derived compounds. |
Accessions | A0A494C1B2 O14718 ENST00000652276.1 ENST00000317735.7 |