Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 42 studies | 60% ± 27% | |
macrophage | 35 studies | 48% ± 21% | |
capillary endothelial cell | 17 studies | 63% ± 23% | |
endothelial cell of artery | 14 studies | 73% ± 24% | |
oligodendrocyte | 14 studies | 38% ± 18% | |
vein endothelial cell | 13 studies | 67% ± 19% | |
endothelial cell of vascular tree | 12 studies | 54% ± 25% | |
type I pneumocyte | 11 studies | 71% ± 30% | |
goblet cell | 11 studies | 55% ± 12% | |
type II pneumocyte | 10 studies | 74% ± 26% | |
myeloid cell | 8 studies | 31% ± 14% | |
pericyte | 7 studies | 41% ± 29% | |
epithelial cell | 6 studies | 47% ± 27% | |
secretory cell | 6 studies | 57% ± 27% | |
classical monocyte | 6 studies | 32% ± 17% | |
monocyte | 5 studies | 42% ± 15% | |
club cell | 5 studies | 53% ± 30% | |
dendritic cell | 5 studies | 27% ± 16% | |
ciliated cell | 5 studies | 26% ± 7% | |
glomerular endothelial cell | 4 studies | 93% ± 3% | |
basal cell | 4 studies | 38% ± 21% | |
mononuclear phagocyte | 4 studies | 33% ± 12% | |
deuterosomal cell | 3 studies | 23% ± 11% | |
retinal pigment epithelial cell | 3 studies | 61% ± 15% | |
fibroblast | 3 studies | 42% ± 19% | |
acinar cell | 3 studies | 61% ± 7% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
pancreas | 99% | 32369.63 | 324 / 328 | 97% | 611.90 | 172 / 178 |
lung | 100% | 24054.94 | 578 / 578 | 94% | 990.32 | 1083 / 1155 |
breast | 98% | 12163.14 | 449 / 459 | 92% | 336.66 | 1025 / 1118 |
ovary | 90% | 5896.42 | 162 / 180 | 99% | 885.46 | 425 / 430 |
stomach | 97% | 14817.99 | 350 / 359 | 91% | 420.56 | 261 / 286 |
intestine | 97% | 7536.14 | 933 / 966 | 91% | 405.89 | 482 / 527 |
adrenal gland | 97% | 12005.41 | 249 / 258 | 86% | 370.82 | 198 / 230 |
bladder | 100% | 6574.38 | 21 / 21 | 80% | 400.68 | 403 / 504 |
kidney | 98% | 7210.79 | 87 / 89 | 73% | 339.76 | 662 / 901 |
thymus | 78% | 4049.12 | 512 / 653 | 85% | 218.32 | 515 / 605 |
uterus | 85% | 4652.69 | 145 / 170 | 78% | 257.46 | 356 / 459 |
brain | 72% | 5971.11 | 1904 / 2642 | 86% | 340.23 | 604 / 705 |
esophagus | 66% | 5640.20 | 955 / 1445 | 69% | 231.22 | 127 / 183 |
skin | 42% | 2001.55 | 752 / 1809 | 89% | 758.07 | 419 / 472 |
adipose | 100% | 22144.58 | 1204 / 1204 | 0% | 0 | 0 / 0 |
spleen | 100% | 11665.38 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 211.68 | 1 / 1 |
prostate | 57% | 2305.37 | 140 / 245 | 41% | 59.41 | 208 / 502 |
heart | 96% | 7017.46 | 830 / 861 | 0% | 0 | 0 / 0 |
blood vessel | 80% | 7227.36 | 1066 / 1335 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 69% | 191.57 | 31 / 45 |
eye | 0% | 0 | 0 / 0 | 68% | 172.13 | 54 / 80 |
liver | 12% | 588.44 | 27 / 226 | 53% | 129.72 | 216 / 406 |
muscle | 46% | 1690.50 | 373 / 803 | 0% | 0 | 0 / 0 |
peripheral blood | 19% | 1174.47 | 173 / 929 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 14% | 18.94 | 4 / 29 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0051607 | Biological process | defense response to virus |
GO_0050830 | Biological process | defense response to Gram-positive bacterium |
GO_0070062 | Cellular component | extracellular exosome |
GO_0004522 | Molecular function | ribonuclease A activity |
GO_0016829 | Molecular function | lyase activity |
GO_0005515 | Molecular function | protein binding |
GO_0004540 | Molecular function | RNA nuclease activity |
GO_0003676 | Molecular function | nucleic acid binding |
Gene name | RNASE1 |
Protein name | pancreatic ribonuclease (EC 4.6.1.18) Ribonuclease pancreatic (EC 4.6.1.18) (HP-RNase) (RIB-1) (RNase UpI-1) (Ribonuclease 1) (RNase 1) (Ribonuclease A) (RNase A) |
Synonyms | RNS1 RIB1 |
Description | FUNCTION: Endonuclease that catalyzes the cleavage of RNA on the 3' side of pyrimidine nucleotides. Acts on single-stranded and double-stranded RNA. . |
Accessions | ENST00000555698.5 ENST00000340900.3 G3V357 ENST00000412779.2 ENST00000397967.5 ENST00000397970.4 P07998 |