I. Expression across cell types
Name | Number of supported studies  | Average coverage | |
|---|---|---|---|
| Mueller cell | 5 studies | 79% ± 16% | |
| retinal pigment epithelial cell | 4 studies | 81% ± 14% |
Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| Mueller cell | 5 studies | 79% ± 16% | |
| retinal pigment epithelial cell | 4 studies | 81% ± 14% |
Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| eye | 5 studies | 21% ± 5% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| brain | 91% | 417.83 | 2392 / 2642 | 84% | 11.09 | 593 / 705 |
| heart | 60% | 38.06 | 520 / 861 | 0% | 0 | 0 / 0 |
| stomach | 46% | 30.82 | 164 / 359 | 4% | 0.12 | 11 / 286 |
| lung | 43% | 38.77 | 247 / 578 | 0% | 0.00 | 4 / 1155 |
| intestine | 34% | 19.69 | 330 / 966 | 5% | 0.15 | 26 / 527 |
| esophagus | 38% | 26.19 | 550 / 1445 | 1% | 0.01 | 1 / 183 |
| breast | 32% | 14.56 | 147 / 459 | 5% | 0.24 | 60 / 1118 |
| bladder | 29% | 13.29 | 6 / 21 | 1% | 0.03 | 7 / 504 |
| skin | 10% | 4.23 | 185 / 1809 | 15% | 0.38 | 70 / 472 |
| adipose | 24% | 22.08 | 294 / 1204 | 0% | 0 | 0 / 0 |
| eye | 0% | 0 | 0 / 0 | 16% | 2.00 | 13 / 80 |
| prostate | 12% | 7.33 | 30 / 245 | 0% | 0 | 0 / 502 |
| uterus | 4% | 1.82 | 7 / 170 | 3% | 0.07 | 13 / 459 |
| blood vessel | 6% | 2.68 | 75 / 1335 | 0% | 0 | 0 / 0 |
| ovary | 2% | 0.68 | 3 / 180 | 2% | 0.12 | 8 / 430 |
| muscle | 2% | 0.69 | 16 / 803 | 0% | 0 | 0 / 0 |
| thymus | 1% | 0.31 | 7 / 653 | 0% | 0 | 0 / 605 |
| liver | 0% | 0 | 0 / 226 | 0% | 0.01 | 2 / 406 |
| kidney | 0% | 0 | 0 / 89 | 0% | 0.01 | 3 / 901 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| adrenal gland | 0% | 0 | 0 / 258 | 0% | 0 | 0 / 230 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| pancreas | 0% | 0 | 0 / 328 | 0% | 0 | 0 / 178 |
| peripheral blood | 0% | 0 | 0 / 929 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spleen | 0% | 0 | 0 / 241 | 0% | 0 | 0 / 0 |
| tonsil | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 45 |
| ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
| GO_0007601 | Biological process | visual perception |
| GO_0007186 | Biological process | G protein-coupled receptor signaling pathway |
| GO_0009584 | Biological process | detection of visible light |
| GO_0007602 | Biological process | phototransduction |
| GO_0071482 | Biological process | cellular response to light stimulus |
| GO_0005886 | Cellular component | plasma membrane |
| GO_0008020 | Molecular function | G protein-coupled photoreceptor activity |
| GO_0004930 | Molecular function | G protein-coupled receptor activity |
| GO_0005515 | Molecular function | protein binding |
| Gene name | RGR |
| Protein name | RPE-retinal G protein-coupled receptor Retinal G protein coupled receptor isoform 2 Retinal G protein coupled receptor RGR protein (Retinal G protein coupled receptor, isoform CRA_b) Retinal G protein coupled receptor isoform 1 (Retinal G protein coupled receptor, isoform CRA_a) |
| Synonyms | hCG_20085 |
| Description | FUNCTION: Receptor for all-trans- and 11-cis-retinal. Binds preferentially to the former and may catalyze the isomerization of the chromophore by a retinochrome-like mechanism. |
| Accessions | ENST00000651237.1 ENST00000359452.9 [P47804-2] A0A0S2Z494 A0A494C0U5 ENST00000651155.1 ENST00000652122.1 A0A494C063 ENST00000358110.7 [P47804-3] A0A494C170 A0A0S2Z498 Q96HT6 ENST00000478727.6 A0A494BZT6 ENST00000650774.1 ENST00000483744.6 ENST00000483660.5 A0A494C1A1 ENST00000497161.1 A0A494C1E7 ENST00000652092.2 [P47804-1] A0A494C1G9 ENST00000652073.1 A0A494C187 A0A494C1U1 ENST00000652310.1 P47804 ENST00000650682.1 |
