Name | Number of supported studies | Average coverage | |
---|---|---|---|
macrophage | 28 studies | 36% ± 18% | |
astrocyte | 18 studies | 42% ± 22% | |
endothelial cell | 17 studies | 32% ± 14% | |
oligodendrocyte | 14 studies | 42% ± 15% | |
glutamatergic neuron | 12 studies | 48% ± 25% | |
fibroblast | 11 studies | 27% ± 10% | |
microglial cell | 10 studies | 33% ± 9% | |
myeloid cell | 10 studies | 36% ± 19% | |
GABAergic neuron | 9 studies | 45% ± 26% | |
oligodendrocyte precursor cell | 7 studies | 23% ± 7% | |
neuron | 6 studies | 36% ± 16% | |
interneuron | 6 studies | 46% ± 29% | |
adipocyte | 6 studies | 18% ± 3% | |
ciliated cell | 6 studies | 32% ± 17% | |
cardiac muscle cell | 5 studies | 38% ± 11% | |
pericyte | 5 studies | 21% ± 6% | |
monocyte | 4 studies | 24% ± 5% | |
granule cell | 4 studies | 37% ± 14% | |
retinal pigment epithelial cell | 4 studies | 36% ± 16% | |
dendritic cell | 4 studies | 21% ± 6% | |
mononuclear phagocyte | 4 studies | 32% ± 12% | |
Mueller cell | 4 studies | 33% ± 9% | |
glomerular endothelial cell | 3 studies | 29% ± 2% | |
GABAergic interneuron | 3 studies | 32% ± 8% | |
progenitor cell | 3 studies | 25% ± 2% | |
classical monocyte | 3 studies | 24% ± 7% | |
mesothelial cell | 3 studies | 39% ± 17% | |
epithelial cell | 3 studies | 30% ± 10% | |
smooth muscle cell | 3 studies | 32% ± 7% | |
connective tissue cell | 3 studies | 22% ± 3% | |
ependymal cell | 3 studies | 45% ± 18% | |
endothelial cell of lymphatic vessel | 3 studies | 26% ± 9% | |
type I pneumocyte | 3 studies | 23% ± 3% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 3980.55 | 2639 / 2642 | 100% | 51.16 | 704 / 705 |
adrenal gland | 100% | 3353.57 | 258 / 258 | 93% | 20.92 | 214 / 230 |
lung | 100% | 4170.57 | 578 / 578 | 92% | 23.29 | 1059 / 1155 |
kidney | 100% | 2655.56 | 89 / 89 | 92% | 46.67 | 825 / 901 |
breast | 100% | 3508.16 | 459 / 459 | 90% | 16.93 | 1009 / 1118 |
ovary | 100% | 4406.98 | 180 / 180 | 90% | 19.57 | 386 / 430 |
thymus | 99% | 2380.62 | 648 / 653 | 88% | 15.49 | 532 / 605 |
skin | 99% | 2513.22 | 1798 / 1809 | 88% | 26.01 | 414 / 472 |
prostate | 99% | 2171.43 | 243 / 245 | 84% | 12.98 | 422 / 502 |
uterus | 100% | 2718.76 | 170 / 170 | 70% | 12.36 | 320 / 459 |
bladder | 100% | 2956.43 | 21 / 21 | 64% | 10.39 | 325 / 504 |
esophagus | 88% | 2480.07 | 1273 / 1445 | 74% | 11.42 | 136 / 183 |
intestine | 99% | 2368.06 | 959 / 966 | 59% | 7.93 | 311 / 527 |
pancreas | 44% | 386.04 | 143 / 328 | 90% | 17.25 | 161 / 178 |
stomach | 60% | 1309.53 | 214 / 359 | 70% | 10.43 | 201 / 286 |
adipose | 100% | 4894.06 | 1204 / 1204 | 0% | 0 | 0 / 0 |
spleen | 100% | 7452.02 | 241 / 241 | 0% | 0 | 0 / 0 |
blood vessel | 99% | 2141.43 | 1315 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 97% | 29.67 | 28 / 29 |
heart | 92% | 1727.52 | 795 / 861 | 0% | 0 | 0 / 0 |
liver | 42% | 437.08 | 95 / 226 | 48% | 6.82 | 193 / 406 |
tonsil | 0% | 0 | 0 / 0 | 73% | 12.30 | 33 / 45 |
peripheral blood | 31% | 624.00 | 287 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 26% | 2.65 | 21 / 80 |
muscle | 16% | 144.80 | 130 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0007265 | Biological process | Ras protein signal transduction |
GO_0007264 | Biological process | small GTPase-mediated signal transduction |
GO_0005575 | Cellular component | cellular_component |
GO_0005829 | Cellular component | cytosol |
GO_0005886 | Cellular component | plasma membrane |
GO_0005085 | Molecular function | guanyl-nucleotide exchange factor activity |
GO_0005515 | Molecular function | protein binding |
Gene name | RGL1 |
Protein name | Ral guanine nucleotide dissociation stimulator-like 1, isoform CRA_d (cDNA FLJ50518, highly similar to Ral guanine nucleotide dissociation stimulator-like 1) Ral guanine nucleotide dissociation stimulator-like 1 (RalGDS-like 1) |
Synonyms | hCG_2025089 RGL KIAA0959 |
Description | FUNCTION: Probable guanine nucleotide exchange factor. |
Accessions | ENST00000360851.4 [Q9NZL6-1] Q9NZL6 B7Z2W5 ENST00000304685.8 [Q9NZL6-2] |