Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 13 studies | 26% ± 9% | |
glutamatergic neuron | 12 studies | 43% ± 26% | |
oligodendrocyte | 12 studies | 39% ± 13% | |
GABAergic neuron | 9 studies | 40% ± 24% | |
astrocyte | 9 studies | 35% ± 15% | |
microglial cell | 9 studies | 33% ± 11% | |
oligodendrocyte precursor cell | 9 studies | 34% ± 15% | |
macrophage | 8 studies | 34% ± 14% | |
dendritic cell | 6 studies | 20% ± 3% | |
fibroblast | 6 studies | 21% ± 6% | |
interneuron | 6 studies | 44% ± 24% | |
T cell | 5 studies | 20% ± 5% | |
neuron | 4 studies | 44% ± 12% | |
epithelial cell | 4 studies | 38% ± 22% | |
adipocyte | 4 studies | 19% ± 3% | |
myeloid cell | 4 studies | 27% ± 7% | |
club cell | 4 studies | 27% ± 10% | |
endothelial cell of lymphatic vessel | 4 studies | 26% ± 6% | |
monocyte | 4 studies | 28% ± 7% | |
pericyte | 4 studies | 22% ± 8% | |
CD4-positive, alpha-beta T cell | 3 studies | 18% ± 2% | |
mast cell | 3 studies | 21% ± 3% | |
GABAergic amacrine cell | 3 studies | 25% ± 10% | |
amacrine cell | 3 studies | 24% ± 9% | |
glycinergic amacrine cell | 3 studies | 20% ± 3% | |
retina horizontal cell | 3 studies | 34% ± 13% | |
rod bipolar cell | 3 studies | 37% ± 19% | |
respiratory goblet cell | 3 studies | 19% ± 3% | |
neural progenitor cell | 3 studies | 19% ± 3% | |
B cell | 3 studies | 24% ± 6% | |
alveolar macrophage | 3 studies | 30% ± 10% | |
natural killer cell | 3 studies | 21% ± 3% | |
type I pneumocyte | 3 studies | 23% ± 6% | |
type II pneumocyte | 3 studies | 22% ± 7% | |
lymphocyte | 3 studies | 31% ± 10% | |
basal cell | 3 studies | 34% ± 19% | |
smooth muscle cell | 3 studies | 19% ± 1% | |
granule cell | 3 studies | 33% ± 5% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 3994.21 | 1445 / 1445 | 100% | 16.21 | 183 / 183 |
breast | 100% | 3020.71 | 459 / 459 | 100% | 14.40 | 1116 / 1118 |
intestine | 100% | 2860.66 | 966 / 966 | 100% | 10.11 | 526 / 527 |
bladder | 100% | 3031.24 | 21 / 21 | 100% | 12.18 | 503 / 504 |
prostate | 100% | 3425.01 | 245 / 245 | 100% | 14.60 | 501 / 502 |
thymus | 100% | 3216.65 | 653 / 653 | 100% | 11.77 | 602 / 605 |
lung | 100% | 2748.16 | 576 / 578 | 100% | 11.62 | 1152 / 1155 |
stomach | 100% | 2316.15 | 359 / 359 | 99% | 10.47 | 284 / 286 |
uterus | 100% | 2762.06 | 170 / 170 | 99% | 13.55 | 454 / 459 |
brain | 99% | 2703.45 | 2608 / 2642 | 100% | 10.22 | 705 / 705 |
kidney | 100% | 1974.22 | 89 / 89 | 98% | 9.41 | 887 / 901 |
ovary | 100% | 2508.28 | 180 / 180 | 98% | 6.36 | 422 / 430 |
pancreas | 99% | 1540.63 | 326 / 328 | 98% | 9.04 | 175 / 178 |
adrenal gland | 100% | 2669.72 | 258 / 258 | 97% | 8.29 | 223 / 230 |
skin | 100% | 4416.70 | 1809 / 1809 | 96% | 8.92 | 451 / 472 |
liver | 100% | 1126.65 | 226 / 226 | 88% | 4.76 | 359 / 406 |
adipose | 100% | 2548.24 | 1204 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 8.96 | 29 / 29 |
spleen | 100% | 3686.38 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 16.39 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 4.18 | 1 / 1 |
blood vessel | 100% | 2456.01 | 1334 / 1335 | 0% | 0 | 0 / 0 |
heart | 97% | 1486.61 | 833 / 861 | 0% | 0 | 0 / 0 |
muscle | 97% | 1220.99 | 775 / 803 | 0% | 0 | 0 / 0 |
peripheral blood | 74% | 1442.78 | 691 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 66% | 3.77 | 53 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0032367 | Biological process | intracellular cholesterol transport |
GO_0005802 | Cellular component | trans-Golgi network |
GO_0055037 | Cellular component | recycling endosome |
Gene name | RELCH |
Protein name | RAB11-binding protein RELCH (LisH domain and HEAT repeat-containing protein KIAA1468) (RAB11 binding and LisH domain, coiled-coil and HEAT repeat-containing) (RAB11-binding protein containing LisH, coiled-coil, and HEAT repeats) KIAA1468 protein (KIAA1468, isoform CRA_a) RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing |
Synonyms | hCG_34283 KIAA1468 |
Description | FUNCTION: Regulates intracellular cholesterol distribution from recycling endosomes to the trans-Golgi network through interactions with RAB11 and OSBP . Functions in membrane tethering and promotes OSBP-mediated cholesterol transfer between RAB11-bound recycling endosomes and OSBP-bound Golgi-like membranes . . |
Accessions | ENST00000256858.10 [Q9P260-2] A0A075B768 A0A075B785 Q9P260 ENST00000644646.2 A0A2R8Y566 ENST00000398130.6 [Q9P260-1] ENST00000587725.5 Q96ES0 ENST00000588446.1 |