Name | Number of supported studies | Average coverage | |
---|---|---|---|
astrocyte | 12 studies | 38% ± 19% | |
glutamatergic neuron | 11 studies | 47% ± 24% | |
oligodendrocyte | 11 studies | 42% ± 13% | |
GABAergic neuron | 10 studies | 50% ± 27% | |
oligodendrocyte precursor cell | 10 studies | 34% ± 15% | |
neuron | 6 studies | 42% ± 17% | |
endothelial cell | 6 studies | 34% ± 19% | |
interneuron | 6 studies | 61% ± 23% | |
epithelial cell | 5 studies | 32% ± 18% | |
amacrine cell | 5 studies | 23% ± 8% | |
retinal cone cell | 5 studies | 31% ± 11% | |
type I pneumocyte | 5 studies | 28% ± 8% | |
type II pneumocyte | 5 studies | 19% ± 6% | |
granule cell | 4 studies | 37% ± 6% | |
microglial cell | 4 studies | 28% ± 10% | |
retinal ganglion cell | 4 studies | 30% ± 15% | |
cardiac muscle cell | 4 studies | 22% ± 2% | |
retina horizontal cell | 4 studies | 30% ± 11% | |
retinal rod cell | 4 studies | 36% ± 10% | |
ciliated cell | 4 studies | 32% ± 11% | |
club cell | 4 studies | 20% ± 7% | |
GABAergic interneuron | 3 studies | 57% ± 8% | |
GABAergic amacrine cell | 3 studies | 31% ± 11% | |
glycinergic amacrine cell | 3 studies | 25% ± 5% | |
ependymal cell | 3 studies | 37% ± 18% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
stomach | 99% | 1924.43 | 357 / 359 | 99% | 8.67 | 283 / 286 |
intestine | 100% | 2377.85 | 966 / 966 | 98% | 7.33 | 518 / 527 |
brain | 100% | 3331.86 | 2639 / 2642 | 98% | 10.71 | 692 / 705 |
prostate | 100% | 1685.52 | 245 / 245 | 96% | 6.01 | 484 / 502 |
pancreas | 100% | 1221.52 | 328 / 328 | 94% | 7.32 | 168 / 178 |
thymus | 100% | 2978.58 | 653 / 653 | 94% | 6.16 | 571 / 605 |
ovary | 98% | 732.38 | 177 / 180 | 93% | 5.80 | 400 / 430 |
breast | 95% | 1106.45 | 438 / 459 | 92% | 6.65 | 1033 / 1118 |
esophagus | 99% | 1321.12 | 1433 / 1445 | 83% | 7.60 | 151 / 183 |
lung | 99% | 1303.13 | 574 / 578 | 80% | 4.76 | 926 / 1155 |
bladder | 100% | 1642.33 | 21 / 21 | 78% | 4.64 | 394 / 504 |
uterus | 100% | 1044.16 | 170 / 170 | 71% | 3.69 | 327 / 459 |
adrenal gland | 81% | 470.18 | 209 / 258 | 78% | 4.50 | 179 / 230 |
kidney | 100% | 2020.78 | 89 / 89 | 52% | 3.20 | 469 / 901 |
skin | 73% | 1280.50 | 1313 / 1809 | 32% | 1.02 | 149 / 472 |
spleen | 100% | 1046.23 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 6.06 | 1 / 1 |
heart | 94% | 1208.33 | 811 / 861 | 0% | 0 | 0 / 0 |
muscle | 94% | 678.24 | 753 / 803 | 0% | 0 | 0 / 0 |
blood vessel | 92% | 692.66 | 1225 / 1335 | 0% | 0 | 0 / 0 |
adipose | 84% | 566.91 | 1011 / 1204 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 78% | 4.35 | 35 / 45 |
liver | 24% | 150.14 | 55 / 226 | 28% | 1.50 | 115 / 406 |
lymph node | 0% | 0 | 0 / 0 | 52% | 1.71 | 15 / 29 |
peripheral blood | 45% | 237.55 | 422 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 26% | 0.80 | 21 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0007265 | Biological process | Ras protein signal transduction |
GO_0035556 | Biological process | intracellular signal transduction |
GO_0032485 | Biological process | regulation of Ral protein signal transduction |
GO_0005575 | Cellular component | cellular_component |
GO_0005886 | Cellular component | plasma membrane |
GO_0005737 | Cellular component | cytoplasm |
GO_0005085 | Molecular function | guanyl-nucleotide exchange factor activity |
Gene name | RALGPS1 |
Protein name | Ral GEF with PH domain and SH3 binding motif 1 Ras-specific guanine nucleotide-releasing factor RalGPS1 (Ral GEF with PH domain and SH3-binding motif 1) (Ral guanine nucleotide exchange factor 2) (RalGEF 2) (RalA exchange factor RalGPS1) |
Synonyms | RALGEF2 KIAA0351 |
Description | FUNCTION: Guanine nucleotide exchange factor (GEF) for the small GTPase RALA. May be involved in cytoskeletal organization (By similarity). Guanine nucleotide exchange factor for. . |
Accessions | ENST00000373434.5 [Q5JS13-2] ENST00000394022.7 [Q5JS13-3] ENST00000438723.1 Q5JS13 ENST00000394011.7 [Q5JS13-6] ENST00000373436.5 [Q5JS13-4] ENST00000319107.8 ENST00000424082.6 [Q5JS13-7] ENST00000259351.10 [Q5JS13-1] Q5JT61 H0Y6A2 |