Insufficient scRNA-seq data for expression of RAD54L at single-cell level.
Insufficient scRNA-seq data for expression of RAD54L at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
skin | 90% | 245.84 | 1623 / 1809 | 88% | 6.27 | 416 / 472 |
lung | 83% | 86.05 | 479 / 578 | 78% | 6.06 | 902 / 1155 |
intestine | 64% | 108.47 | 620 / 966 | 93% | 7.68 | 489 / 527 |
esophagus | 54% | 132.80 | 778 / 1445 | 94% | 7.91 | 172 / 183 |
stomach | 55% | 64.32 | 198 / 359 | 92% | 7.21 | 262 / 286 |
ovary | 48% | 26.62 | 86 / 180 | 94% | 8.27 | 404 / 430 |
bladder | 43% | 27.24 | 9 / 21 | 89% | 7.42 | 450 / 504 |
uterus | 38% | 21.19 | 64 / 170 | 94% | 11.08 | 433 / 459 |
brain | 90% | 119.54 | 2389 / 2642 | 40% | 2.30 | 283 / 705 |
breast | 49% | 26.98 | 225 / 459 | 74% | 4.66 | 826 / 1118 |
thymus | 100% | 130.49 | 652 / 653 | 15% | 1.63 | 89 / 605 |
kidney | 90% | 81.22 | 80 / 89 | 23% | 1.12 | 204 / 901 |
tonsil | 0% | 0 | 0 / 0 | 100% | 11.77 | 45 / 45 |
spleen | 99% | 174.73 | 239 / 241 | 0% | 0 | 0 / 0 |
prostate | 89% | 68.08 | 217 / 245 | 9% | 0.34 | 45 / 502 |
lymph node | 0% | 0 | 0 / 0 | 83% | 8.33 | 24 / 29 |
adrenal gland | 65% | 38.73 | 168 / 258 | 8% | 0.37 | 18 / 230 |
peripheral blood | 63% | 481.75 | 587 / 929 | 0% | 0 | 0 / 0 |
pancreas | 11% | 5.59 | 36 / 328 | 42% | 1.93 | 75 / 178 |
liver | 18% | 15.81 | 40 / 226 | 25% | 1.12 | 100 / 406 |
adipose | 41% | 22.78 | 496 / 1204 | 0% | 0 | 0 / 0 |
heart | 35% | 18.95 | 304 / 861 | 0% | 0 | 0 / 0 |
blood vessel | 35% | 16.43 | 470 / 1335 | 0% | 0 | 0 / 0 |
muscle | 29% | 10.60 | 232 / 803 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 5% | 0.12 | 4 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0006281 | Biological process | DNA repair |
GO_0045003 | Biological process | double-strand break repair via synthesis-dependent strand annealing |
GO_0010212 | Biological process | response to ionizing radiation |
GO_0008340 | Biological process | determination of adult lifespan |
GO_0007131 | Biological process | reciprocal meiotic recombination |
GO_0006338 | Biological process | chromatin remodeling |
GO_0051321 | Biological process | meiotic cell cycle |
GO_0051276 | Biological process | chromosome organization |
GO_0006310 | Biological process | DNA recombination |
GO_0009410 | Biological process | response to xenobiotic stimulus |
GO_0032991 | Cellular component | protein-containing complex |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005634 | Cellular component | nucleus |
GO_0004386 | Molecular function | helicase activity |
GO_0015616 | Molecular function | DNA translocase activity |
GO_0036310 | Molecular function | ATP-dependent DNA/DNA annealing activity |
GO_0046872 | Molecular function | metal ion binding |
GO_0005524 | Molecular function | ATP binding |
GO_0140658 | Molecular function | ATP-dependent chromatin remodeler activity |
GO_0005515 | Molecular function | protein binding |
GO_0016887 | Molecular function | ATP hydrolysis activity |
Gene name | RAD54L |
Protein name | RAD54 like Alternative protein RAD54L DNA repair and recombination protein RAD54-like (EC 3.6.4.12) (RAD54 homolog) (hHR54) (hRAD54) |
Synonyms | RAD54A |
Description | FUNCTION: Plays an essential role in homologous recombination (HR) which is a major pathway for repairing DNA double-strand breaks (DSBs), single-stranded DNA (ssDNA) gaps, and stalled or collapsed replication forks . Acts as a molecular motor during the homology search and guides RAD51 ssDNA along a donor dsDNA thereby changing the homology search from the diffusion-based mechanism to a motor-guided mechanism. Also plays an essential role in RAD51-mediated synaptic complex formation which consists of three strands encased in a protein filament formed once homology is recognized. Once DNA strand exchange occured, dissociates RAD51 from nucleoprotein filaments formed on dsDNA (By similarity). . |
Accessions | L8E913 A0A590UJ90 ENST00000669994.1 A0A087WV39 V9GYD3 ENST00000442598.5 ENST00000476687.2 Q92698 A0A590UJJ7 A0A087WW72 ENST00000473251.2 ENST00000655446.1 A0A087X124 ENST00000661701.1 ENST00000469835.6 ENST00000459678.2 V9GYX6 ENST00000472889.2 ENST00000493032.5 ENST00000657122.1 A0A590UJ71 A0A590UJQ8 A0A087WWG5 ENST00000671528.1 A0A087WTB0 ENST00000493985.5 ENST00000488942.5 ENST00000463715.5 ENST00000371975.9 A0A087WVW5 |