Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 14 studies | 26% ± 11% | |
astrocyte | 12 studies | 36% ± 17% | |
glutamatergic neuron | 10 studies | 44% ± 27% | |
oligodendrocyte precursor cell | 9 studies | 32% ± 13% | |
fibroblast | 9 studies | 22% ± 6% | |
GABAergic neuron | 8 studies | 46% ± 26% | |
ciliated cell | 8 studies | 27% ± 11% | |
oligodendrocyte | 8 studies | 28% ± 10% | |
microglial cell | 7 studies | 26% ± 5% | |
retinal cone cell | 7 studies | 40% ± 16% | |
neuron | 6 studies | 34% ± 15% | |
interneuron | 6 studies | 46% ± 27% | |
macrophage | 6 studies | 26% ± 5% | |
retinal rod cell | 6 studies | 41% ± 10% | |
epithelial cell | 5 studies | 31% ± 12% | |
retina horizontal cell | 5 studies | 25% ± 10% | |
adipocyte | 5 studies | 24% ± 4% | |
cardiac muscle cell | 5 studies | 32% ± 9% | |
endothelial cell of lymphatic vessel | 5 studies | 21% ± 4% | |
pericyte | 5 studies | 21% ± 4% | |
granule cell | 4 studies | 22% ± 4% | |
retinal bipolar neuron | 4 studies | 22% ± 4% | |
connective tissue cell | 4 studies | 16% ± 1% | |
GABAergic interneuron | 3 studies | 31% ± 3% | |
amacrine cell | 3 studies | 27% ± 11% | |
glycinergic amacrine cell | 3 studies | 22% ± 5% | |
ependymal cell | 3 studies | 36% ± 11% | |
type I pneumocyte | 3 studies | 20% ± 4% | |
lymphocyte | 3 studies | 18% ± 3% | |
basal cell | 3 studies | 33% ± 16% | |
smooth muscle cell | 3 studies | 19% ± 3% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 1115.07 | 1445 / 1445 | 100% | 18.17 | 183 / 183 |
lung | 100% | 1155.44 | 578 / 578 | 100% | 23.20 | 1155 / 1155 |
ovary | 100% | 1336.28 | 180 / 180 | 100% | 23.73 | 430 / 430 |
brain | 100% | 1414.77 | 2641 / 2642 | 100% | 47.83 | 705 / 705 |
breast | 100% | 1226.03 | 459 / 459 | 100% | 25.76 | 1116 / 1118 |
prostate | 100% | 1153.72 | 245 / 245 | 100% | 23.18 | 501 / 502 |
bladder | 100% | 1087.81 | 21 / 21 | 99% | 20.91 | 501 / 504 |
uterus | 100% | 1432.88 | 170 / 170 | 99% | 26.06 | 456 / 459 |
thymus | 100% | 1382.00 | 653 / 653 | 99% | 26.78 | 601 / 605 |
stomach | 100% | 852.14 | 359 / 359 | 99% | 18.24 | 283 / 286 |
kidney | 100% | 961.22 | 89 / 89 | 99% | 19.61 | 891 / 901 |
intestine | 100% | 1271.10 | 966 / 966 | 99% | 19.83 | 521 / 527 |
adrenal gland | 100% | 994.33 | 258 / 258 | 99% | 26.22 | 227 / 230 |
skin | 100% | 894.76 | 1807 / 1809 | 98% | 27.69 | 462 / 472 |
pancreas | 98% | 455.60 | 322 / 328 | 98% | 23.72 | 175 / 178 |
liver | 99% | 414.44 | 224 / 226 | 89% | 10.36 | 360 / 406 |
adipose | 100% | 1231.51 | 1204 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 21.36 | 29 / 29 |
spleen | 100% | 1095.83 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 27.99 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 10.65 | 1 / 1 |
blood vessel | 100% | 1160.73 | 1334 / 1335 | 0% | 0 | 0 / 0 |
heart | 100% | 1008.97 | 858 / 861 | 0% | 0 | 0 / 0 |
muscle | 94% | 358.84 | 758 / 803 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 91% | 15.87 | 73 / 80 |
peripheral blood | 64% | 417.19 | 599 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006886 | Biological process | intracellular protein transport |
GO_0036064 | Cellular component | ciliary basal body |
GO_0005886 | Cellular component | plasma membrane |
GO_0035253 | Cellular component | ciliary rootlet |
GO_0012505 | Cellular component | endomembrane system |
GO_0005737 | Cellular component | cytoplasm |
GO_0019003 | Molecular function | GDP binding |
GO_0005525 | Molecular function | GTP binding |
GO_0005515 | Molecular function | protein binding |
GO_0003924 | Molecular function | GTPase activity |
Gene name | RAB28 |
Protein name | Ras-related protein Rab-28 RAB28, member RAS oncogene family RAB28 protein (RAB28, member RAS oncogene family) |
Synonyms | |
Description | |
Accessions | H0Y9S6 ENST00000338176.8 [P51157-3] ENST00000288723.9 [P51157-2] ENST00000510528.1 H0Y9G4 ENST00000630951.1 ENST00000504644.1 P51157 H0Y927 ENST00000508274.5 ENST00000511649.5 ENST00000330852.10 [P51157-1] Q8WVF3 |