Name | Number of supported studies | Average coverage | |
---|---|---|---|
mast cell | 27 studies | 38% ± 18% | |
platelet | 10 studies | 33% ± 10% | |
oligodendrocyte precursor cell | 9 studies | 28% ± 11% | |
glutamatergic neuron | 8 studies | 44% ± 21% | |
megakaryocyte | 5 studies | 76% ± 8% | |
GABAergic neuron | 5 studies | 40% ± 19% | |
luminal cell of prostate epithelium | 4 studies | 28% ± 5% | |
goblet cell | 4 studies | 36% ± 32% | |
neuron | 3 studies | 18% ± 2% | |
basal cell | 3 studies | 23% ± 6% | |
club cell | 3 studies | 23% ± 6% | |
type I pneumocyte | 3 studies | 17% ± 2% | |
interneuron | 3 studies | 38% ± 9% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 6 studies | 35% ± 22% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
prostate | 95% | 2247.98 | 232 / 245 | 100% | 44.69 | 502 / 502 |
pancreas | 91% | 555.56 | 299 / 328 | 90% | 16.02 | 160 / 178 |
lung | 93% | 934.75 | 538 / 578 | 86% | 19.08 | 998 / 1155 |
breast | 58% | 743.90 | 267 / 459 | 94% | 35.19 | 1046 / 1118 |
esophagus | 51% | 1405.70 | 730 / 1445 | 92% | 23.67 | 168 / 183 |
stomach | 78% | 1812.16 | 280 / 359 | 62% | 15.08 | 176 / 286 |
bladder | 52% | 562.90 | 11 / 21 | 72% | 14.89 | 365 / 504 |
brain | 56% | 708.13 | 1469 / 2642 | 59% | 6.29 | 419 / 705 |
skin | 93% | 2135.10 | 1691 / 1809 | 7% | 0.56 | 34 / 472 |
intestine | 45% | 308.04 | 435 / 966 | 56% | 9.24 | 293 / 527 |
ureter | 0% | 0 | 0 / 0 | 100% | 20.84 | 1 / 1 |
tonsil | 0% | 0 | 0 / 0 | 96% | 24.31 | 43 / 45 |
uterus | 6% | 51.45 | 10 / 170 | 74% | 16.46 | 340 / 459 |
adrenal gland | 6% | 31.19 | 16 / 258 | 48% | 7.41 | 110 / 230 |
spleen | 51% | 184.98 | 122 / 241 | 0% | 0 | 0 / 0 |
thymus | 0% | 1.89 | 2 / 653 | 22% | 2.63 | 132 / 605 |
kidney | 4% | 14.93 | 4 / 89 | 16% | 1.78 | 142 / 901 |
peripheral blood | 17% | 66.15 | 158 / 929 | 0% | 0 | 0 / 0 |
liver | 1% | 2.41 | 2 / 226 | 15% | 2.03 | 60 / 406 |
adipose | 15% | 56.69 | 179 / 1204 | 0% | 0 | 0 / 0 |
ovary | 1% | 2.99 | 2 / 180 | 10% | 0.69 | 45 / 430 |
heart | 0% | 2.34 | 4 / 861 | 0% | 0 | 0 / 0 |
blood vessel | 0% | 9.53 | 6 / 1335 | 0% | 0 | 0 / 0 |
muscle | 0% | 0.34 | 1 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 80 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0048488 | Biological process | synaptic vesicle endocytosis |
GO_0006887 | Biological process | exocytosis |
GO_0071985 | Biological process | multivesicular body sorting pathway |
GO_0045921 | Biological process | positive regulation of exocytosis |
GO_0099641 | Biological process | anterograde axonal protein transport |
GO_0070382 | Cellular component | exocytic vesicle |
GO_0016324 | Cellular component | apical plasma membrane |
GO_0005795 | Cellular component | Golgi stack |
GO_0005886 | Cellular component | plasma membrane |
GO_0031088 | Cellular component | platelet dense granule membrane |
GO_0030672 | Cellular component | synaptic vesicle membrane |
GO_0070062 | Cellular component | extracellular exosome |
GO_0005794 | Cellular component | Golgi apparatus |
GO_0042589 | Cellular component | zymogen granule membrane |
GO_0030140 | Cellular component | trans-Golgi network transport vesicle |
GO_0005770 | Cellular component | late endosome |
GO_0030141 | Cellular component | secretory granule |
GO_0032585 | Cellular component | multivesicular body membrane |
GO_0042470 | Cellular component | melanosome |
GO_1904115 | Cellular component | axon cytoplasm |
GO_0019003 | Molecular function | GDP binding |
GO_0019904 | Molecular function | protein domain specific binding |
GO_0003925 | Molecular function | G protein activity |
GO_0031489 | Molecular function | myosin V binding |
GO_0005525 | Molecular function | GTP binding |
GO_0005515 | Molecular function | protein binding |
GO_0003924 | Molecular function | GTPase activity |
Gene name | RAB27B |
Protein name | RAB27B, member RAS oncogene family Ras-related protein Rab-27B (EC 3.6.5.2) (C25KG) |
Synonyms | |
Description | FUNCTION: Small GTPase which cycles between active GTP-bound and inactive GDP-bound states. In its active state, binds to a variety of effector proteins to regulate homeostasis of late endocytic pathway, including endosomal positioning, maturation and secretion . Plays a role in NTRK2/TRKB axonal anterograde transport by facilitating the association of NTRK2/TRKB with KLC1 . May be involved in targeting uroplakins to urothelial apical membranes (By similarity). . |
Accessions | O00194 K7ES41 ENST00000592334.1 ENST00000586570.5 ENST00000262094.10 K7EJ38 |