PTCHD1 report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
astrocyte	7 studies	33% ± 13%	Explore
glutamatergic neuron	3 studies	47% ± 4%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
brain	3 studies	30% ± 7%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
brain	91%	1915.90	2410 / 2642	84%	3.33	594 / 705
prostate	89%	837.42	219 / 245	40%	0.79	201 / 502
bladder	81%	1203.71	17 / 21	25%	1.43	128 / 504
uterus	92%	1477.08	157 / 170	10%	0.63	44 / 459
ureter	0%	0	0 / 0	100%	3.12	1 / 1
intestine	80%	2409.17	773 / 966	5%	0.15	25 / 527
breast	57%	698.38	263 / 459	21%	1.04	232 / 1118
esophagus	64%	867.91	920 / 1445	8%	0.16	14 / 183
blood vessel	70%	1173.01	929 / 1335	0%	0	0 / 0
stomach	49%	1095.69	176 / 359	11%	0.42	31 / 286
lung	19%	60.99	109 / 578	9%	0.29	109 / 1155
adrenal gland	4%	18.76	11 / 258	20%	1.21	47 / 230
adipose	22%	123.88	260 / 1204	0%	0	0 / 0
thymus	11%	30.82	70 / 653	4%	0.14	27 / 605
ovary	9%	71.69	17 / 180	4%	0.08	19 / 430
spleen	11%	34.41	27 / 241	0%	0	0 / 0
skin	6%	19.63	102 / 1809	3%	0.07	16 / 472
tonsil	0%	0	0 / 0	9%	0.33	4 / 45
pancreas	0%	1.04	1 / 328	6%	0.49	11 / 178
kidney	1%	6.65	1 / 89	3%	0.11	25 / 901
muscle	2%	8.36	19 / 803	0%	0	0 / 0
heart	2%	6.09	19 / 861	0%	0	0 / 0
liver	0%	0	0 / 226	0%	0.01	1 / 406
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
eye	0%	0	0 / 0	0%	0	0 / 80
gingiva	0%	0	0 / 0	0%	0	0 / 0
lymph node	0%	0	0 / 0	0%	0	0 / 29
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
peripheral blood	0%	0	0 / 929	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0