Name | Number of supported studies | Average coverage | |
---|---|---|---|
oligodendrocyte | 16 studies | 72% ± 20% | |
oligodendrocyte precursor cell | 12 studies | 34% ± 16% | |
smooth muscle cell | 12 studies | 29% ± 17% | |
glutamatergic neuron | 11 studies | 43% ± 21% | |
ciliated cell | 9 studies | 25% ± 6% | |
GABAergic neuron | 8 studies | 44% ± 16% | |
endothelial cell | 7 studies | 35% ± 19% | |
retinal ganglion cell | 7 studies | 87% ± 16% | |
astrocyte | 6 studies | 31% ± 14% | |
neuron | 5 studies | 34% ± 16% | |
granule cell | 4 studies | 39% ± 13% | |
abnormal cell | 4 studies | 20% ± 3% | |
amacrine cell | 4 studies | 29% ± 9% | |
retinal bipolar neuron | 4 studies | 36% ± 11% | |
adipocyte | 4 studies | 29% ± 2% | |
ON-bipolar cell | 4 studies | 51% ± 30% | |
interneuron | 4 studies | 43% ± 18% | |
epithelial cell of proximal tubule | 4 studies | 31% ± 14% | |
GABAergic interneuron | 3 studies | 23% ± 6% | |
microglial cell | 3 studies | 27% ± 8% | |
myofibroblast cell | 3 studies | 43% ± 29% | |
rod bipolar cell | 3 studies | 43% ± 16% | |
muscle cell | 3 studies | 45% ± 37% | |
enteroendocrine cell | 3 studies | 29% ± 13% | |
goblet cell | 3 studies | 40% ± 13% | |
endothelial cell of lymphatic vessel | 3 studies | 17% ± 1% | |
macrophage | 3 studies | 21% ± 8% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 93% | 10568.09 | 2447 / 2642 | 98% | 44.13 | 693 / 705 |
prostate | 82% | 10950.66 | 200 / 245 | 95% | 33.36 | 475 / 502 |
intestine | 84% | 25666.12 | 807 / 966 | 51% | 8.38 | 271 / 527 |
kidney | 26% | 1263.03 | 23 / 89 | 85% | 43.76 | 769 / 901 |
esophagus | 77% | 26873.60 | 1113 / 1445 | 33% | 7.42 | 61 / 183 |
bladder | 81% | 24843.52 | 17 / 21 | 25% | 3.50 | 124 / 504 |
uterus | 91% | 13213.12 | 155 / 170 | 13% | 7.39 | 59 / 459 |
blood vessel | 99% | 31629.49 | 1322 / 1335 | 0% | 0 | 0 / 0 |
adrenal gland | 12% | 720.03 | 31 / 258 | 80% | 45.13 | 184 / 230 |
stomach | 46% | 11933.39 | 165 / 359 | 45% | 12.98 | 130 / 286 |
eye | 0% | 0 | 0 / 0 | 75% | 23.77 | 60 / 80 |
ovary | 10% | 907.51 | 18 / 180 | 52% | 7.48 | 225 / 430 |
skin | 8% | 371.01 | 144 / 1809 | 30% | 6.85 | 141 / 472 |
adipose | 30% | 1927.26 | 366 / 1204 | 0% | 0 | 0 / 0 |
pancreas | 0% | 0 | 0 / 328 | 30% | 5.91 | 54 / 178 |
muscle | 29% | 2543.43 | 234 / 803 | 0% | 0 | 0 / 0 |
lung | 8% | 377.67 | 49 / 578 | 14% | 4.17 | 162 / 1155 |
breast | 10% | 530.67 | 47 / 459 | 7% | 0.98 | 77 / 1118 |
heart | 12% | 581.62 | 101 / 861 | 0% | 0 | 0 / 0 |
thymus | 4% | 199.28 | 25 / 653 | 5% | 0.54 | 31 / 605 |
tonsil | 0% | 0 | 0 / 0 | 7% | 0.69 | 3 / 45 |
lymph node | 0% | 0 | 0 / 0 | 3% | 0.25 | 1 / 29 |
spleen | 2% | 105.63 | 6 / 241 | 0% | 0 | 0 / 0 |
peripheral blood | 1% | 52.41 | 12 / 929 | 0% | 0 | 0 / 0 |
liver | 0% | 0 | 0 / 226 | 0% | 0.13 | 2 / 406 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0006915 | Biological process | apoptotic process |
GO_0005829 | Cellular component | cytosol |
GO_0005737 | Cellular component | cytoplasm |
GO_0016462 | Molecular function | pyrophosphatase activity |
GO_0005515 | Molecular function | protein binding |
GO_0046872 | Molecular function | metal ion binding |
Gene name | PRUNE2 |
Protein name | Protein prune homolog 2 (BNIP2 motif-containing molecule at the C-terminal region 1) Truncated PRUNE2 Alternative protein PRUNE2 Prune homolog 2 with BCH domain |
Synonyms | KIAA0367 C9orf65 BMCC1 BNIPXL |
Description | FUNCTION: May play an important role in regulating differentiation, survival and aggressiveness of the tumor cells. . |
Accessions | L8E865 ENST00000424866.1 G8XWS8 ENST00000426088.5 Q8WUY3 Q5JUB8 ENST00000376718.8 [Q8WUY3-1] ENST00000443509.6 H7BZH9 ENST00000376713.3 Q5JUB9 A0A088AWP5 E9PDC2 ENST00000376717.6 B9EK61 X6R9J3 G8XWS9 D6RTK6 ENST00000428286.5 |