PRPH | OmnibusX

Name	Number of supported studies	Average coverage
retinal ganglion cell	6 studies	62% ± 33%	Explore
neuron	4 studies	65% ± 26%	Explore

sc-RNAseq data

Insufficient scRNA-seq data for expression of PRPH at tissue level.

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
intestine	99%	918.12	958 / 966	8%	0.22	42 / 527
uterus	80%	146.68	136 / 170	19%	2.22	85 / 459
adrenal gland	33%	128.09	85 / 258	65%	28.89	149 / 230
bladder	86%	90.38	18 / 21	7%	0.16	33 / 504
brain	28%	52.32	739 / 2642	62%	2.10	435 / 705
adipose	88%	202.15	1055 / 1204	0%	0	0 / 0
pancreas	45%	37.79	146 / 328	42%	2.67	74 / 178
spleen	85%	92.22	205 / 241	0%	0	0 / 0
breast	78%	121.53	356 / 459	6%	0.20	65 / 1118
prostate	77%	169.38	188 / 245	6%	0.18	29 / 502
blood vessel	69%	95.79	918 / 1335	0%	0	0 / 0
esophagus	59%	196.73	859 / 1445	8%	0.15	14 / 183
stomach	58%	249.05	209 / 359	9%	0.22	25 / 286
lung	57%	66.76	330 / 578	6%	0.17	65 / 1155
ovary	39%	42.86	70 / 180	15%	0.45	63 / 430
thymus	42%	31.93	272 / 653	12%	0.25	71 / 605
skin	45%	40.44	811 / 1809	7%	0.29	32 / 472
kidney	18%	15.64	16 / 89	13%	0.51	115 / 901
heart	26%	25.37	225 / 861	0%	0	0 / 0
tonsil	0%	0	0 / 0	9%	0.34	4 / 45
muscle	3%	2.44	25 / 803	0%	0	0 / 0
liver	1%	0.60	2 / 226	2%	0.04	7 / 406
eye	0%	0	0 / 0	3%	0.15	2 / 80
peripheral blood	0%	0.05	1 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
lymph node	0%	0	0 / 0	0%	0	0 / 29
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1

GO_0043204	Cellular component	perikaryon
GO_0045098	Cellular component	type III intermediate filament
GO_0030424	Cellular component	axon
GO_0005737	Cellular component	cytoplasm
GO_0070062	Cellular component	extracellular exosome
GO_0005886	Cellular component	plasma membrane
GO_0016020	Cellular component	membrane
GO_0005882	Cellular component	intermediate filament
GO_0005515	Molecular function	protein binding
GO_0005198	Molecular function	structural molecule activity

Gene name	PRPH
Protein name	Peripherin (Neurofilament 4) Peripherin
Synonyms	NEF4 PRPH1
Description	FUNCTION: Class-III neuronal intermediate filament protein (By similarity). May form an independent structural network without the involvement of other neurofilaments or may cooperate with the neuronal intermediate filament proteins NEFL, NEFH, NEFM and INA to form a filamentous network . Assembly of the neuronal intermediate filaments may be regulated by RAB7A (By similarity). Plays a role in the development of unmyelinated sensory neurons (By similarity). May be involved in axon elongation and axon regeneration after injury (By similarity). Inhibits neurite extension in type II spiral ganglion neurons in the cochlea (By similarity). .
Accessions	ENST00000451891.4 H7C5W5 F8W835 ENST00000257860.9 [P41219-1] P41219 ENST00000532332.2

PRPH report