Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
bladder | 100% | 1227.81 | 21 / 21 | 100% | 22.24 | 504 / 504 |
esophagus | 100% | 1051.26 | 1445 / 1445 | 100% | 33.15 | 183 / 183 |
ovary | 100% | 951.39 | 180 / 180 | 100% | 19.17 | 430 / 430 |
prostate | 100% | 997.24 | 245 / 245 | 100% | 34.68 | 502 / 502 |
stomach | 100% | 782.15 | 359 / 359 | 100% | 27.02 | 286 / 286 |
uterus | 100% | 1272.90 | 170 / 170 | 100% | 23.17 | 459 / 459 |
breast | 100% | 1104.39 | 459 / 459 | 100% | 25.34 | 1117 / 1118 |
brain | 100% | 716.19 | 2634 / 2642 | 100% | 18.50 | 705 / 705 |
lung | 99% | 799.70 | 575 / 578 | 100% | 25.73 | 1155 / 1155 |
intestine | 100% | 1055.06 | 966 / 966 | 99% | 26.73 | 524 / 527 |
thymus | 100% | 872.00 | 652 / 653 | 100% | 17.22 | 602 / 605 |
kidney | 100% | 594.94 | 89 / 89 | 99% | 17.95 | 892 / 901 |
adrenal gland | 100% | 1018.98 | 258 / 258 | 98% | 17.41 | 226 / 230 |
pancreas | 98% | 534.60 | 323 / 328 | 99% | 17.87 | 176 / 178 |
skin | 100% | 1378.65 | 1809 / 1809 | 97% | 29.07 | 456 / 472 |
liver | 100% | 483.93 | 226 / 226 | 93% | 9.68 | 378 / 406 |
adipose | 100% | 1180.93 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 1162.47 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 24.39 | 29 / 29 |
spleen | 100% | 869.04 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 22.60 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 11.48 | 1 / 1 |
muscle | 100% | 800.68 | 801 / 803 | 0% | 0 | 0 / 0 |
heart | 98% | 620.18 | 841 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 76% | 9.12 | 61 / 80 |
peripheral blood | 58% | 705.22 | 541 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006362 | Biological process | transcription elongation by RNA polymerase I |
GO_1990830 | Biological process | cellular response to leukemia inhibitory factor |
GO_0006352 | Biological process | DNA-templated transcription initiation |
GO_0005736 | Cellular component | RNA polymerase I complex |
GO_0005654 | Cellular component | nucleoplasm |
Gene name | POLR1F |
Protein name | DNA-directed RNA polymerase I subunit RPA43 (DNA-directed RNA polymerase I subunit F) (Twist neighbor protein) Alternative protein TWISTNB |
Synonyms | TWISTNB |
Description | FUNCTION: Component of RNA polymerase I (Pol I), a DNA-dependent RNA polymerase which synthesizes ribosomal RNA precursors using the four ribonucleoside triphosphates as substrates. Through its association with RRN3/TIF-IA may be involved in recruitment of Pol I to rDNA promoters. . |
Accessions | L8E9H7 ENST00000222567.6 Q3B726 |