Name | Number of supported studies | Average coverage | |
---|---|---|---|
oligodendrocyte | 11 studies | 30% ± 11% | |
glutamatergic neuron | 9 studies | 49% ± 26% | |
endothelial cell | 7 studies | 24% ± 10% | |
GABAergic neuron | 7 studies | 42% ± 22% | |
astrocyte | 6 studies | 30% ± 14% | |
microglial cell | 5 studies | 22% ± 4% | |
adipocyte | 5 studies | 33% ± 1% | |
oligodendrocyte precursor cell | 5 studies | 29% ± 10% | |
macrophage | 5 studies | 22% ± 3% | |
type I pneumocyte | 5 studies | 27% ± 9% | |
type II pneumocyte | 5 studies | 22% ± 7% | |
neuron | 4 studies | 27% ± 13% | |
cardiac muscle cell | 4 studies | 17% ± 2% | |
Mueller cell | 4 studies | 28% ± 7% | |
retinal rod cell | 4 studies | 24% ± 5% | |
endothelial cell of lymphatic vessel | 4 studies | 18% ± 2% | |
interneuron | 4 studies | 50% ± 22% | |
GABAergic interneuron | 3 studies | 22% ± 3% | |
retinal cone cell | 3 studies | 27% ± 10% | |
alveolar macrophage | 3 studies | 20% ± 5% | |
monocyte | 3 studies | 19% ± 3% | |
dendritic cell | 3 studies | 17% ± 1% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 2070.48 | 2635 / 2642 | 98% | 10.09 | 690 / 705 |
esophagus | 100% | 1016.70 | 1442 / 1445 | 96% | 6.02 | 176 / 183 |
thymus | 100% | 2078.50 | 653 / 653 | 94% | 7.64 | 570 / 605 |
lung | 100% | 1615.99 | 577 / 578 | 93% | 5.41 | 1077 / 1155 |
skin | 100% | 1303.86 | 1807 / 1809 | 92% | 5.43 | 433 / 472 |
prostate | 100% | 1312.88 | 244 / 245 | 91% | 6.84 | 459 / 502 |
adrenal gland | 100% | 2265.69 | 258 / 258 | 89% | 11.94 | 205 / 230 |
pancreas | 99% | 688.30 | 324 / 328 | 86% | 4.16 | 153 / 178 |
kidney | 100% | 877.39 | 89 / 89 | 85% | 5.25 | 763 / 901 |
stomach | 100% | 1029.41 | 359 / 359 | 84% | 3.86 | 239 / 286 |
ovary | 100% | 1596.97 | 180 / 180 | 81% | 4.03 | 350 / 430 |
breast | 100% | 1393.21 | 459 / 459 | 81% | 4.01 | 900 / 1118 |
intestine | 100% | 1403.28 | 966 / 966 | 76% | 3.01 | 402 / 527 |
uterus | 100% | 1539.88 | 170 / 170 | 67% | 2.79 | 308 / 459 |
bladder | 100% | 1033.29 | 21 / 21 | 67% | 2.68 | 336 / 504 |
liver | 100% | 771.47 | 225 / 226 | 51% | 1.81 | 207 / 406 |
adipose | 100% | 1549.62 | 1204 / 1204 | 0% | 0 | 0 / 0 |
spleen | 100% | 1038.70 | 241 / 241 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 1503.21 | 1332 / 1335 | 0% | 0 | 0 / 0 |
muscle | 98% | 741.83 | 788 / 803 | 0% | 0 | 0 / 0 |
heart | 96% | 1066.49 | 823 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 86% | 578.53 | 796 / 929 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 82% | 4.58 | 37 / 45 |
eye | 0% | 0 | 0 / 0 | 76% | 3.14 | 61 / 80 |
lymph node | 0% | 0 | 0 / 0 | 55% | 2.52 | 16 / 29 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0045445 | Biological process | myoblast differentiation |
GO_0005794 | Cellular component | Golgi apparatus |
GO_0005886 | Cellular component | plasma membrane |
GO_0005737 | Cellular component | cytoplasm |
GO_0046872 | Molecular function | metal ion binding |
Gene name | PLEKHM3 |
Protein name | Pleckstrin homology domain-containing family M member 3 (PH domain-containing family M member 3) (Differentiation associated protein) Pleckstrin homology domain containing M3 |
Synonyms | PLEKHM1L DAPR |
Description | FUNCTION: Involved in skeletal muscle differentiation. May act as a scaffold protein for AKT1 during muscle differentiation. . |
Accessions | C9J119 H7C0J9 ENST00000427836.8 [Q6ZWE6-1] ENST00000447645.5 Q6ZWE6 ENST00000457206.1 |