Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 5 studies | 21% ± 5% | |
plasmacytoid dendritic cell | 5 studies | 22% ± 6% | |
classical monocyte | 3 studies | 31% ± 4% | |
epithelial cell | 3 studies | 32% ± 8% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
peripheral blood | 3 studies | 18% ± 1% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 4719.31 | 1445 / 1445 | 100% | 39.99 | 183 / 183 |
ovary | 100% | 6689.84 | 180 / 180 | 100% | 99.85 | 430 / 430 |
skin | 100% | 3756.67 | 1809 / 1809 | 100% | 56.95 | 472 / 472 |
stomach | 100% | 3852.09 | 359 / 359 | 100% | 37.24 | 286 / 286 |
prostate | 100% | 5484.83 | 245 / 245 | 100% | 39.45 | 501 / 502 |
breast | 100% | 3906.95 | 459 / 459 | 100% | 43.10 | 1115 / 1118 |
thymus | 100% | 8065.83 | 653 / 653 | 100% | 60.05 | 603 / 605 |
bladder | 100% | 5496.48 | 21 / 21 | 100% | 39.95 | 502 / 504 |
lung | 100% | 5899.04 | 578 / 578 | 100% | 45.12 | 1150 / 1155 |
adrenal gland | 100% | 5055.46 | 258 / 258 | 100% | 43.97 | 229 / 230 |
uterus | 100% | 7460.91 | 170 / 170 | 100% | 47.16 | 457 / 459 |
intestine | 100% | 5578.17 | 966 / 966 | 99% | 32.55 | 522 / 527 |
pancreas | 100% | 2087.50 | 327 / 328 | 99% | 36.11 | 176 / 178 |
kidney | 100% | 3935.44 | 89 / 89 | 98% | 42.69 | 885 / 901 |
brain | 98% | 2671.18 | 2583 / 2642 | 100% | 32.76 | 705 / 705 |
liver | 100% | 2071.92 | 226 / 226 | 96% | 31.26 | 389 / 406 |
adipose | 100% | 3742.54 | 1204 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 44.88 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 44.17 | 29 / 29 |
spleen | 100% | 8247.61 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 33.13 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 42.08 | 1 / 1 |
blood vessel | 100% | 3740.16 | 1334 / 1335 | 0% | 0 | 0 / 0 |
peripheral blood | 100% | 7186.26 | 926 / 929 | 0% | 0 | 0 / 0 |
muscle | 99% | 2171.65 | 797 / 803 | 0% | 0 | 0 / 0 |
heart | 99% | 2601.82 | 853 / 861 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0009954 | Biological process | proximal/distal pattern formation |
GO_0048568 | Biological process | embryonic organ development |
GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
GO_0009887 | Biological process | animal organ morphogenesis |
GO_0001654 | Biological process | eye development |
GO_0048666 | Biological process | neuron development |
GO_0030326 | Biological process | embryonic limb morphogenesis |
GO_0007420 | Biological process | brain development |
GO_0045944 | Biological process | positive regulation of transcription by RNA polymerase II |
GO_0000785 | Cellular component | chromatin |
GO_0005667 | Cellular component | transcription regulator complex |
GO_0005634 | Cellular component | nucleus |
GO_0000978 | Molecular function | RNA polymerase II cis-regulatory region sequence-specific DNA binding |
GO_0140297 | Molecular function | DNA-binding transcription factor binding |
GO_0001228 | Molecular function | DNA-binding transcription activator activity, RNA polymerase II-specific |
GO_0000977 | Molecular function | RNA polymerase II transcription regulatory region sequence-specific DNA binding |
GO_0000981 | Molecular function | DNA-binding transcription factor activity, RNA polymerase II-specific |
GO_0003682 | Molecular function | chromatin binding |
GO_0005515 | Molecular function | protein binding |
Gene name | PBX2 |
Protein name | Pre-B-cell leukemia transcription factor 2 (Homeobox protein PBX2) (Protein G17) |
Synonyms | G17 |
Description | FUNCTION: Transcriptional activator that binds the sequence 5'-ATCAATCAA-3'. Activates transcription of PF4 in complex with MEIS1. . |
Accessions | ENST00000431537.2 P40425 ENST00000453487.2 ENST00000453961.2 ENST00000420432.2 ENST00000375050.6 ENST00000433552.2 ENST00000383270.4 |