Name | Number of supported studies | Average coverage | |
---|---|---|---|
oligodendrocyte | 13 studies | 44% ± 13% | |
glutamatergic neuron | 11 studies | 52% ± 24% | |
GABAergic neuron | 10 studies | 48% ± 26% | |
oligodendrocyte precursor cell | 9 studies | 24% ± 7% | |
astrocyte | 9 studies | 31% ± 14% | |
retinal rod cell | 8 studies | 63% ± 18% | |
interneuron | 6 studies | 55% ± 21% | |
endothelial cell of lymphatic vessel | 6 studies | 40% ± 16% | |
neuron | 4 studies | 36% ± 14% | |
endothelial cell | 4 studies | 40% ± 17% | |
retinal bipolar neuron | 4 studies | 26% ± 4% | |
granule cell | 4 studies | 34% ± 11% | |
retinal cone cell | 4 studies | 31% ± 4% | |
GABAergic interneuron | 3 studies | 48% ± 3% | |
epithelial cell | 3 studies | 20% ± 4% | |
microglial cell | 3 studies | 33% ± 13% | |
amacrine cell | 3 studies | 35% ± 10% | |
GABAergic amacrine cell | 3 studies | 30% ± 11% | |
Mueller cell | 3 studies | 30% ± 12% | |
glycinergic amacrine cell | 3 studies | 31% ± 10% | |
rod bipolar cell | 3 studies | 41% ± 8% | |
retinal pigment epithelial cell | 3 studies | 31% ± 15% | |
erythrocyte | 3 studies | 34% ± 7% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 1987.20 | 2633 / 2642 | 99% | 11.46 | 701 / 705 |
adrenal gland | 100% | 2113.42 | 258 / 258 | 93% | 10.66 | 213 / 230 |
thymus | 99% | 654.23 | 646 / 653 | 87% | 5.68 | 528 / 605 |
kidney | 93% | 388.79 | 83 / 89 | 89% | 4.75 | 799 / 901 |
prostate | 81% | 344.70 | 199 / 245 | 98% | 6.21 | 493 / 502 |
stomach | 80% | 297.61 | 286 / 359 | 86% | 5.73 | 245 / 286 |
uterus | 69% | 267.22 | 117 / 170 | 90% | 14.23 | 411 / 459 |
intestine | 58% | 207.93 | 565 / 966 | 92% | 5.58 | 485 / 527 |
pancreas | 59% | 206.34 | 192 / 328 | 89% | 4.68 | 159 / 178 |
breast | 54% | 236.73 | 247 / 459 | 91% | 6.09 | 1022 / 1118 |
esophagus | 54% | 224.96 | 782 / 1445 | 90% | 9.87 | 165 / 183 |
lung | 55% | 204.35 | 318 / 578 | 86% | 6.04 | 988 / 1155 |
skin | 81% | 514.87 | 1458 / 1809 | 54% | 4.91 | 257 / 472 |
bladder | 43% | 265.57 | 9 / 21 | 87% | 8.40 | 439 / 504 |
ovary | 28% | 82.79 | 50 / 180 | 96% | 8.98 | 411 / 430 |
ureter | 0% | 0 | 0 / 0 | 100% | 3.66 | 1 / 1 |
spleen | 99% | 772.26 | 239 / 241 | 0% | 0 | 0 / 0 |
peripheral blood | 82% | 2239.63 | 766 / 929 | 0% | 0 | 0 / 0 |
heart | 79% | 520.70 | 684 / 861 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 78% | 3.99 | 35 / 45 |
eye | 0% | 0 | 0 / 0 | 73% | 6.91 | 58 / 80 |
muscle | 51% | 186.99 | 412 / 803 | 0% | 0 | 0 / 0 |
liver | 2% | 8.69 | 4 / 226 | 38% | 2.15 | 153 / 406 |
adipose | 31% | 109.30 | 370 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 14% | 0.46 | 4 / 29 |
blood vessel | 4% | 13.11 | 53 / 1335 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0007286 | Biological process | spermatid development |
GO_0006869 | Biological process | lipid transport |
GO_0097440 | Cellular component | apical dendrite |
GO_0005829 | Cellular component | cytosol |
GO_0097038 | Cellular component | perinuclear endoplasmic reticulum |
GO_0005886 | Cellular component | plasma membrane |
GO_0015485 | Molecular function | cholesterol binding |
GO_0005515 | Molecular function | protein binding |
Gene name | OSBP2 |
Protein name | Oxysterol-binding protein Oxysterol-binding protein 2 (Oxysterol-binding protein-related protein 4) (ORP-4) (OSBP-related protein 4) Oxysterol binding protein 2 |
Synonyms | KIAA1664 ORP4 hCG_41303 OSBPL4 |
Description | FUNCTION: Binds 7-ketocholesterol. |
Accessions | ENST00000454145.5 ENST00000438716.3 [Q969R2-3] Q969R2 H7C428 C9J7J0 ENST00000424224.5 ENST00000452656.5 Q6ZN50 H7C001 ENST00000535268.5 [Q969R2-5] A0A0A0MSB4 H7C1R2 ENST00000403222.7 C9JS84 H7C313 ENST00000401475.5 [Q969R2-4] ENST00000453621.5 ENST00000437268.6 [Q969R2-6] ENST00000407373.5 ENST00000431368.5 H7C368 ENST00000433183.2 ENST00000446658.6 [Q969R2-2] ENST00000445781.5 ENST00000332585.11 [Q969R2-1] |