ONECUT2 | OmnibusX

sc-RNAseq data

Insufficient scRNA-seq data for expression of ONECUT2 at tissue level.

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
liver	100%	2700.47	226 / 226	97%	13.20	392 / 406
pancreas	100%	1188.68	328 / 328	89%	13.46	159 / 178
adrenal gland	75%	105.38	193 / 258	49%	1.69	112 / 230
brain	76%	778.92	2009 / 2642	34%	0.69	240 / 705
stomach	9%	7.03	32 / 359	59%	9.03	170 / 286
prostate	13%	12.95	33 / 245	51%	1.97	255 / 502
esophagus	3%	4.53	38 / 1445	60%	11.33	109 / 183
intestine	6%	17.16	62 / 966	49%	4.21	256 / 527
uterus	7%	5.39	12 / 170	31%	1.94	142 / 459
ovary	25%	19.06	45 / 180	12%	0.88	52 / 430
tonsil	0%	0	0 / 0	36%	0.60	16 / 45
bladder	5%	2.71	1 / 21	25%	1.44	127 / 504
kidney	15%	22.27	13 / 89	14%	0.56	128 / 901
lung	1%	0.55	4 / 578	26%	2.55	302 / 1155
breast	1%	1.09	5 / 459	20%	0.77	229 / 1118
skin	2%	1.09	29 / 1809	17%	0.54	81 / 472
thymus	18%	13.33	116 / 653	0%	0.02	3 / 605
muscle	3%	3.55	27 / 803	0%	0	0 / 0
peripheral blood	3%	4.55	25 / 929	0%	0	0 / 0
eye	0%	0	0 / 0	3%	0.06	2 / 80
adipose	1%	1.41	13 / 1204	0%	0	0 / 0
blood vessel	1%	0.62	12 / 1335	0%	0	0 / 0
spleen	1%	2.91	2 / 241	0%	0	0 / 0
heart	0%	0.11	1 / 861	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
lymph node	0%	0	0 / 0	0%	0	0 / 29
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1

GO_0060271	Biological process	cilium assembly
GO_1905319	Biological process	mesenchymal stem cell migration
GO_0030512	Biological process	negative regulation of transforming growth factor beta receptor signaling pathway
GO_1905322	Biological process	positive regulation of mesenchymal stem cell migration
GO_0006357	Biological process	regulation of transcription by RNA polymerase II
GO_0009887	Biological process	animal organ morphogenesis
GO_0001889	Biological process	liver development
GO_0001952	Biological process	regulation of cell-matrix adhesion
GO_0045165	Biological process	cell fate commitment
GO_0048935	Biological process	peripheral nervous system neuron development
GO_0031018	Biological process	endocrine pancreas development
GO_0007179	Biological process	transforming growth factor beta receptor signaling pathway
GO_0002064	Biological process	epithelial cell development
GO_0045944	Biological process	positive regulation of transcription by RNA polymerase II
GO_0005654	Cellular component	nucleoplasm
GO_0015629	Cellular component	actin cytoskeleton
GO_0000785	Cellular component	chromatin
GO_0005634	Cellular component	nucleus
GO_0000978	Molecular function	RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO_0001228	Molecular function	DNA-binding transcription activator activity, RNA polymerase II-specific
GO_0000981	Molecular function	DNA-binding transcription factor activity, RNA polymerase II-specific
GO_1990837	Molecular function	sequence-specific double-stranded DNA binding

Gene name	ONECUT2
Protein name	One cut domain family member 2 (Hepatocyte nuclear factor 6-beta) (HNF-6-beta) (One cut homeobox 2) (Transcription factor ONECUT-2) (OC-2)
Synonyms	HNF6B
Description	FUNCTION: Transcriptional activator. Activates the transcription of a number of liver genes such as HNF3B.
Accessions	O95948 ENST00000491143.3

ONECUT2 report