Insufficient scRNA-seq data for expression of ODF1 at single-cell level.
Insufficient scRNA-seq data for expression of ODF1 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 68% | 11.34 | 1796 / 2642 | 0% | 0.00 | 2 / 705 |
bladder | 43% | 2.29 | 9 / 21 | 1% | 0.14 | 3 / 504 |
prostate | 31% | 14.88 | 76 / 245 | 0% | 0 | 0 / 502 |
spleen | 27% | 1.55 | 64 / 241 | 0% | 0 | 0 / 0 |
lung | 26% | 2.39 | 150 / 578 | 0% | 0.02 | 4 / 1155 |
peripheral blood | 25% | 3.85 | 233 / 929 | 0% | 0 | 0 / 0 |
ovary | 24% | 1.31 | 44 / 180 | 0% | 0.01 | 1 / 430 |
adrenal gland | 22% | 1.70 | 58 / 258 | 0% | 0.01 | 1 / 230 |
breast | 22% | 10.54 | 100 / 459 | 0% | 0.02 | 4 / 1118 |
stomach | 20% | 1.48 | 73 / 359 | 2% | 0.02 | 5 / 286 |
uterus | 20% | 1.40 | 34 / 170 | 0% | 0 | 0 / 459 |
intestine | 20% | 2.24 | 189 / 966 | 0% | 0.01 | 2 / 527 |
liver | 20% | 1.83 | 45 / 226 | 0% | 0 | 0 / 406 |
esophagus | 18% | 2.76 | 262 / 1445 | 1% | 0.01 | 1 / 183 |
pancreas | 19% | 1.20 | 61 / 328 | 0% | 0 | 0 / 178 |
thymus | 18% | 4.53 | 117 / 653 | 0% | 0.01 | 2 / 605 |
kidney | 18% | 1.99 | 16 / 89 | 0% | 0.00 | 2 / 901 |
adipose | 17% | 2.04 | 203 / 1204 | 0% | 0 | 0 / 0 |
skin | 16% | 2.69 | 296 / 1809 | 0% | 0 | 0 / 472 |
blood vessel | 16% | 1.19 | 207 / 1335 | 0% | 0 | 0 / 0 |
heart | 13% | 0.78 | 114 / 861 | 0% | 0 | 0 / 0 |
muscle | 13% | 3.70 | 103 / 803 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 3% | 0.05 | 1 / 29 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 80 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 45 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0007283 | Biological process | spermatogenesis |
GO_0030154 | Biological process | cell differentiation |
GO_0001520 | Cellular component | outer dense fiber |
GO_0005813 | Cellular component | centrosome |
GO_0036126 | Cellular component | sperm flagellum |
GO_0002177 | Cellular component | manchette |
GO_0005737 | Cellular component | cytoplasm |
GO_0005634 | Cellular component | nucleus |
GO_0005515 | Molecular function | protein binding |
Gene name | ODF1 |
Protein name | Outer dense fiber of sperm tails 1 Outer dense fiber protein 1 (Heat shock protein beta-10) (HspB10) |
Synonyms | ODFP HSPB10 |
Description | FUNCTION: Component of the outer dense fibers (ODF) of spermatozoa. ODF are filamentous structures located on the outside of the axoneme in the midpiece and principal piece of the mammalian sperm tail and may help to maintain the passive elastic structures and elastic recoil of the sperm tail. |
Accessions | Q14990 E5RH17 ENST00000518835.1 ENST00000285402.4 |