Name | Number of supported studies | Average coverage | |
---|---|---|---|
GABAergic neuron | 4 studies | 31% ± 10% | |
endothelial cell | 3 studies | 18% ± 2% | |
glutamatergic neuron | 3 studies | 43% ± 8% | |
astrocyte | 3 studies | 19% ± 2% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 4 studies | 28% ± 6% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
prostate | 100% | 4413.86 | 245 / 245 | 100% | 54.24 | 502 / 502 |
breast | 100% | 3469.70 | 459 / 459 | 100% | 40.98 | 1113 / 1118 |
esophagus | 100% | 6240.98 | 1445 / 1445 | 99% | 32.21 | 182 / 183 |
intestine | 100% | 3887.69 | 966 / 966 | 99% | 30.33 | 523 / 527 |
lung | 99% | 2677.08 | 575 / 578 | 100% | 28.75 | 1151 / 1155 |
adrenal gland | 100% | 5907.74 | 258 / 258 | 99% | 51.93 | 228 / 230 |
stomach | 100% | 3088.80 | 359 / 359 | 99% | 31.24 | 283 / 286 |
pancreas | 100% | 1861.95 | 328 / 328 | 99% | 25.18 | 176 / 178 |
kidney | 100% | 2177.81 | 89 / 89 | 99% | 22.14 | 889 / 901 |
bladder | 100% | 5834.00 | 21 / 21 | 98% | 28.45 | 496 / 504 |
brain | 99% | 3316.91 | 2603 / 2642 | 100% | 30.61 | 704 / 705 |
thymus | 100% | 4290.71 | 653 / 653 | 98% | 28.61 | 595 / 605 |
ovary | 100% | 6875.28 | 180 / 180 | 98% | 21.01 | 422 / 430 |
skin | 100% | 3261.41 | 1809 / 1809 | 97% | 26.63 | 460 / 472 |
uterus | 100% | 4573.72 | 170 / 170 | 97% | 25.47 | 447 / 459 |
liver | 100% | 2093.35 | 226 / 226 | 92% | 16.54 | 373 / 406 |
adipose | 100% | 3405.56 | 1204 / 1204 | 0% | 0 | 0 / 0 |
spleen | 100% | 2028.90 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 9.08 | 1 / 1 |
blood vessel | 100% | 3759.02 | 1334 / 1335 | 0% | 0 | 0 / 0 |
muscle | 100% | 2226.34 | 801 / 803 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 98% | 21.98 | 44 / 45 |
heart | 95% | 1791.08 | 819 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 95% | 20.90 | 76 / 80 |
lymph node | 0% | 0 | 0 / 0 | 38% | 3.41 | 11 / 29 |
peripheral blood | 19% | 203.06 | 179 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0060271 | Biological process | cilium assembly |
GO_0001701 | Biological process | in utero embryonic development |
GO_0007165 | Biological process | signal transduction |
GO_0061024 | Biological process | membrane organization |
GO_0046856 | Biological process | phosphatidylinositol dephosphorylation |
GO_0043647 | Biological process | inositol phosphate metabolic process |
GO_0036092 | Biological process | phosphatidylinositol-3-phosphate biosynthetic process |
GO_0006629 | Biological process | lipid metabolic process |
GO_0006661 | Biological process | phosphatidylinositol biosynthetic process |
GO_0005795 | Cellular component | Golgi stack |
GO_0005886 | Cellular component | plasma membrane |
GO_0001750 | Cellular component | photoreceptor outer segment |
GO_0016020 | Cellular component | membrane |
GO_0005769 | Cellular component | early endosome |
GO_0031901 | Cellular component | early endosome membrane |
GO_0005764 | Cellular component | lysosome |
GO_0030136 | Cellular component | clathrin-coated vesicle |
GO_0005802 | Cellular component | trans-Golgi network |
GO_0005829 | Cellular component | cytosol |
GO_0005737 | Cellular component | cytoplasm |
GO_0030670 | Cellular component | phagocytic vesicle membrane |
GO_0005905 | Cellular component | clathrin-coated pit |
GO_0005798 | Cellular component | Golgi-associated vesicle |
GO_0005634 | Cellular component | nucleus |
GO_0052658 | Molecular function | inositol-1,4,5-trisphosphate 5-phosphatase activity |
GO_0034485 | Molecular function | phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity |
GO_0004439 | Molecular function | phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity |
GO_0031267 | Molecular function | small GTPase binding |
GO_0005096 | Molecular function | GTPase activator activity |
GO_0034596 | Molecular function | phosphatidylinositol phosphate 4-phosphatase activity |
GO_0052659 | Molecular function | inositol-1,3,4,5-tetrakisphosphate 5-phosphatase activity |
GO_0004445 | Molecular function | inositol-polyphosphate 5-phosphatase activity |
GO_0052745 | Molecular function | inositol phosphate phosphatase activity |
GO_0005515 | Molecular function | protein binding |
GO_0043813 | Molecular function | phosphatidylinositol-3,5-bisphosphate 5-phosphatase activity |
Gene name | OCRL |
Protein name | phosphoinositide 5-phosphatase (EC 3.1.3.36) Inositol polyphosphate 5-phosphatase OCRL (EC 3.1.3.36) (EC 3.1.3.56) (Inositol polyphosphate 5-phosphatase OCRL-1) (OCRL-1) (Lowe oculocerebrorenal syndrome protein) (Phosphatidylinositol 3,4,5-triphosphate 5-phosphatase) (EC 3.1.3.86) OCRL protein OCRL inositol polyphosphate-5-phosphatase |
Synonyms | OCRL1 |
Description | FUNCTION: Catalyzes the hydrolysis of the 5-position phosphate of phosphatidylinositol 4,5-bisphosphate (PtdIns(4,5)P2) and phosphatidylinositol-3,4,5-bisphosphate (PtdIns(3,4,5)P3), with the greatest catalytic activity towards PtdIns(4,5)P2 . Able also to hydrolyze the 5-phosphate of inositol 1,4,5-trisphosphate and of inositol 1,3,4,5-tetrakisphosphate . Regulates traffic in the endosomal pathway by regulating the specific pool of phosphatidylinositol 4,5-bisphosphate that is associated with endosomes . Involved in primary cilia assembly . Acts as a regulator of phagocytosis, hydrolyzing PtdIns(4,5)P2 to promote phagosome closure, through attenuation of PI3K signaling . . |
Accessions | ENST00000646010.1 A0A2R8YCN4 ENST00000646914.1 A0A2R8YG38 A0A2R8YF88 ENST00000647245.1 A0A8I5KYX7 ENST00000693473.1 A0A8I5KTM3 ENST00000689093.1 ENST00000691455.1 Q6PJ10 ENST00000371113.9 [Q01968-1] Q504W7 ENST00000357121.5 [Q01968-2] Q01968 A0A2X0TVZ9 |